RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 SIDT2Q8NBJ9 832 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 OR5AR1Q8NGP9 310 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 SNRNP27Q8WVK2 155 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 UBXN4Q92575 508 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 SGSM3Q96HU1 749 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 PDLIM2Q96JY6 352 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 ZPBPQ9BS86 351 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 KIFC1Q9BW19 673 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 ULBP3Q9BZM4 244 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 PLAGL1Q9UM63 463 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 ASF1AQ9Y294 204 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 TDRKHQ9Y2W6 561 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 LOC101059948A0A1B0GTJ6 334 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 BTN3A1O00481 513 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 ATXN7O15265 892 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PHF2O75151 1096 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 NDUFS3O75489 264 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 SPAG6O75602 509 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 KIAA0754O94854 1291 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 GSTM1P09488 218 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 LIFP15018 202 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 ARNTP27540 789 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 ACADLP28330 430 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PPARGP37231 505 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 GNG11P61952 73 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 SARNPP82979 210 aaKnown RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 RHDQ02161 417 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 GSTM4Q03013 218 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 HSPA14Q0VDF9 509 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 ABRQ12979 859 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PRKAA1Q13131 559 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PTRHD1Q6GMV3 140 aaKnown RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 ANKRD11Q6UB99 2663 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 AMIGO1Q86WK6 493 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 VRK3Q8IV63 474 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 NLGN4XQ8N0W4 816 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 NLGN4YQ8NFZ3 816 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-205ENST00000468143 CFAP61Q8NHU2 1237 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PEX13Q92968 403 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 SLC41A2Q96JW4 573 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 CAPZA3Q96KX2 299 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 KLHL25Q9H0H3 589 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 MVB12BQ9H7P6 319 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 IL1RAPL1Q9NZN1 696 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 CIDEBQ9UHD4 219 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 SOX13Q9UN79 622 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 PCDHGA4Q9Y5G9 962 aa11.22□□□□□ -0.61
CDHR3-205ENST00000468143 CFAP47Q6ZTR5 3102 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 GOLGA6L10A0A0M3HER8 536 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TLCD2A6NGC4 264 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 SLC9B1P1A6NJY1 282 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PRMT5O14744 637 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TIAF1O95411 115 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 DLGAP3O95886 979 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TPBGLP0DKB5 382 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 FGF5P12034 268 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 CDH3P22223 829 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 MAP4P27816 1152 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PRDX3P30048 256 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 FMO4P31512 558 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 MAGEA6P43360 314 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TTPAP49638 278 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 HSD11B2P80365 405 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TUBB3Q13509 450 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 LY6DQ14210 128 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 IL11RAQ14626 422 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PPP1R7Q15435 360 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 GPR19Q15760 415 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PWWP2BQ6NUJ5 590 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 UNC5AQ6ZN44 842 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PPP1R3BQ86XI6 285 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 LMNTD1Q8N9Z9 388 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 ZSCAN1Q8NBB4 408 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 GALNT6Q8NCL4 622 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TTC9Q92623 222 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 CD180Q99467 661 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 CARD6Q9BX69 1037 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 DDX47Q9H0S4 455 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 P2RY12Q9H244 342 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TFB2MQ9H5Q4 396 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 MRM3Q9HC36 420 aaKnown RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 PDE7BQ9NP56 450 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 FGF21Q9NSA1 209 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 SOHLH2Q9NX45 425 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 SEMA5BQ9P283 1151 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 LNPEPQ9UIQ6 1025 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 RARRES3Q9UL19 164 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 ICKQ9UPZ9 632 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 CDYLQ9Y232 598 aa11.21□□□□□ -0.61
CDHR3-205ENST00000468143 TMEM184BQ9Y519 407 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-205ENST00000468143 SDR42E2A6NKP2 422 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms