RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TMEM150CB9EJG8 249 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 MATN2O00339 956 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 IFRD1O00458 451 aaPredicted RBP20.46■□□□□ 0.87
COL9A3-207ENST00000467819 BTN3A1O00481 513 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 LDB2O43679 373 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PRSS56P0CW18 603 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 ST6GAL1P15907 406 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PTPN7P35236 360 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PTGIRP43119 386 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 CD97P48960 835 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 CCL11P51671 97 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PGDP52209 483 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 RWDD2BP57060 319 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 GSDMDP57764 484 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PLEKHS1Q5SXH7 462 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 IZUMO3Q5VZ72 239 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 ZNF517Q6ZMY9 492 aaPredicted RBP20.46■□□□□ 0.87
COL9A3-207ENST00000467819 DSELQ8IZU8 1212 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 FAM26EQ8N5C1 309 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 ENDOVQ8N8Q3 282 aaKnown RBP20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PHC3Q8NDX5 983 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 LRRC45Q96CN5 670 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 ING2Q9H160 280 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 OR52A5Q9H2C5 316 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 SNX7Q9UNH6 387 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 DUSP10Q9Y6W6 482 aa20.46■□□□□ 0.87
COL9A3-207ENST00000467819 PRRC2CQ9Y520 2896 aaKnown RBP20.46■□□□□ 0.87
COL9A3-207ENST00000467819 SHANK1Q9Y566 2161 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 C17orf113A0A1B0GUU1 675 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 SOWAHDA6NJG2 315 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 MEN1O00255 615 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 BTN3A3O00478 584 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 CYP2A7P20853 494 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 PDHA2P29803 388 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 PRDX3P30048 256 aaKnown RBP20.45■□□□□ 0.86
COL9A3-207ENST00000467819 CETN2P41208 172 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 PREPP48147 710 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 LMAN1P49257 510 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 FAM69BQ5VUD6 431 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 TAS2R42Q7RTR8 314 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 SERPINA9Q86WD7 417 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 OR52E1Q8NGJ3 308 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 OR1L3Q8NH93 324 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 ALG3Q92685 438 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 LRFN5Q96NI6 719 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 PPP1R2P1Q96PQ5 205 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 HGH1Q9BTY7 390 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 KLHL25Q9H0H3 589 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 VPS37BQ9H9H4 285 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 ARNT2Q9HBZ2 717 aa20.45■□□□□ 0.86
COL9A3-207ENST00000467819 FEZ2Q9UHY8 353 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-207ENST00000467819 IGLV3-16A0A075B6K0 115 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 TTLL8A6PVC2 850 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 TJP3O95049 919 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 PVRP15151 417 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 TPH1P17752 444 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 ACRV1P26436 265 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 PRKG2Q13237 762 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 GPR33Q49SQ1 333 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 ARHGEF18Q6ZSZ5 1173 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 XKR8Q9H6D3 395 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 ACTR5Q9H9F9 607 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-207ENST00000467819 PCMTD2Q9NV79 361 aa20.44■□□□□ 0.86
COL9A3-207ENST00000467819 PCDHGA9Q9Y5G4 932 aaKnown RBP20.44■□□□□ 0.86
COL9A3-207ENST00000467819 EPN1Q9Y6I3 576 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-207ENST00000467819 TRBV5-4A0A0C4DH59 114 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 IPO7O95373 1038 aaKnown RBP20.43■□□□□ 0.86
COL9A3-207ENST00000467819 RAB40ALP0C0E4 278 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 RORAP35398 523 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 PTCHD3Q3KNS1 767 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 NADK2Q4G0N4 442 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 ZNF658BQ4V348 819 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-207ENST00000467819 ZNF789Q5FWF6 425 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 ZNF449Q6P9G9 518 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 SYTL1Q8IYJ3 562 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 CLDN19Q8N6F1 224 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 EFCAB3Q8N7B9 438 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 ADAMTS17Q8TE56 1095 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 C19orf43Q9BQ61 176 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 NLNQ9BYT8 704 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 PITPNM3Q9BZ71 974 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 SLC7A5P2Q9GIP4 190 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 SYTL2Q9HCH5 934 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 PIH1D1Q9NWS0 290 aaKnown RBP20.43■□□□□ 0.86
COL9A3-207ENST00000467819 TCFL5Q9UL49 500 aa20.43■□□□□ 0.86
COL9A3-207ENST00000467819 ICE1Q9Y2F5 2266 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 MAP3K7O43318 606 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 PTMAP06454 111 aaKnown RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 GP1BBP13224 206 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 UQCRFS1P47985 274 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 POU6F1Q14863 301 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 KCTD11Q693B1 232 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 FAM198BQ6UWH4 519 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 AMIGO1Q86WK6 493 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 KLHDC8BQ8IXV7 354 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 PIANPQ8IYJ0 282 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 FAM71DQ8N9W8 422 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 TFGQ92734 400 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 CALR3Q96L12 384 aaKnown RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 TRAPPC9Q96Q05 1148 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms