RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 OR2L2Q8NH16 312 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 PIGKQ92643 395 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TLCD1Q96CP7 247 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SMC6Q96SB8 1091 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TMEM168Q9H0V1 697 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TCEAL2Q9H3H9 227 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 POPDC3Q9HBV1 291 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 SENP1Q9P0U3 644 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TSR3Q9UJK0 312 aaKnown RBP6.73□□□□□ -1.33
SCAF4-204ENST00000467731 TLK1Q9UKI8 766 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 PLEKHM1Q9Y4G2 1056 aa6.73□□□□□ -1.33
SCAF4-204ENST00000467731 A0A1B0GTW7 788 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 C17orf113A0A1B0GUU1 675 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 MGAT4DA6NG13 374 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 BOLA2-SMG1P6H3BVE0 249 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 VILLO15195 856 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SPAG7O75391 227 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 RASGRP1O95267 797 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 MPOP05164 745 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CCDC166P0CW27 439 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 HOXD11P31277 338 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CCNFP41002 786 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 C21orf59P57076 290 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 NXPH1P58417 271 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PHEXP78562 749 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SLC18A2Q05940 514 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CSHL1Q14406 222 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 XKR5Q6UX68 686 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 YTHDF3Q7Z739 585 aaKnown RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TBC1D1Q86TI0 1168 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 LCA5Q86VQ0 697 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 VRK3Q8IV63 474 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CFAP206Q8IYR0 622 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 OXR1Q8N573 874 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ACMSDQ8TDX5 336 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 EEF1AKMT1Q8WVE0 214 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ASZ1Q8WWH4 475 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 INPP5DQ92835 1189 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CLIP3Q96DZ5 547 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 UBXN10Q96LJ8 280 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 OR2M4Q96R27 311 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SYTL2Q9HCH5 934 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF358Q9NW07 568 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DNAJC28Q9NX36 388 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 GALNT8Q9NY28 637 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CDYLQ9Y232 598 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 KCNK6Q9Y257 313 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ACOT9Q9Y305 439 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DGKBQ9Y6T7 804 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 EP300Q09472 2414 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 A0A1B0GVT2 93 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SLC5A10A0PJK1 596 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 A6NHS1 94 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TRIM64CA6NLI5 447 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 KPNA5O15131 536 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SHOX2O60902 331 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 GPC4O75487 556 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TSPAN12O95859 305 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 APOA4P06727 396 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 IDO1P14902 403 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ENPP1P22413 925 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 AK4P27144 223 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PDHA2P29803 388 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PREPP48147 710 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 IL2P60568 153 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TCF15Q12870 199 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DLG1Q12959 904 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 GBX1Q14549 363 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TEAD4Q15561 434 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SYTL3Q4VX76 610 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ACSBG2Q5FVE4 666 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PRAMEF14Q5SWL7 426 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PLEKHS1Q5SXH7 462 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 PEAR1Q5VY43 1037 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 FAM83HQ6ZRV2 1179 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CDHR3Q6ZTQ4 885 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CCL4L1Q8NHW4 92 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 HM13Q8TCT9 377 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 KCTD4Q8WVF5 259 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TMEM159Q96B96 161 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 SKA1Q96BD8 255 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 LINGO1Q96FE5 620 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TIMM29Q9BSF4 260 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 CENPOQ9BU64 300 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 OSGEPL1Q9H4B0 414 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 COG4Q9H9E3 785 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ANKRD6Q9Y2G4 727 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 TMED5Q9Y3A6 229 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 ACTL7BQ9Y614 415 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 DNMT3AQ9Y6K1 912 aaPredicted RBP6.72□□□□□ -1.33
SCAF4-204ENST00000467731 OTOGLQ3ZCN5 2332 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 A0A087X1B8 175 aa6.72□□□□□ -1.33
SCAF4-204ENST00000467731 A0A1B0GVG6 124 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms