RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NXPE1Q8N323 547 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 WDR26Q9H7D7 661 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 G3V2T6 193 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SLC28A2O43868 658 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 RASGRP1O95267 797 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 HSD17B2P37059 387 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 NRIP1P48552 1158 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 DNAJB13P59910 316 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 NAIF1Q69YI7 327 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 VPS35Q96QK1 796 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 MTERF1Q99551 399 aaKnown RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 MCMBPQ9BTE3 642 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 EXD2Q9NVH0 621 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 C6orf89Q6UWU4 347 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 LRRC70Q7Z2Q7 622 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SPHK2Q9NRA0 654 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 AKAP7Q9P0M2 348 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 OR10H1Q9Y4A9 318 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TMEM233B4DJY2 109 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 AP3D1O14617 1153 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 STX16O14662 325 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 PGM3O95394 542 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 FGF3P11487 239 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 NFKB2Q00653 900 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SPIBQ01892 262 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 LMAN2Q12907 356 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 PKDCCQ504Y2 493 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 CDHR3Q6ZTQ4 885 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 CDK15Q96Q40 435 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 KLHL3Q9UH77 587 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TRBV23OR9-2A0A075B6M9 112 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 OR1F1O43749 312 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TULP3O75386 442 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 NUDT14O95848 222 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 ENO2P09104 434 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 IL4RP24394 825 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 AQP1P29972 269 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 SERPINB1P30740 379 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 CCR4P51679 360 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 ACSBG2Q5FVE4 666 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 DPP10Q8N608 796 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 BTN2A2Q8WVV5 523 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 C12orf66Q96MD2 445 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TEFMQ96QE5 360 aaKnown RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 DCUN1D5Q9BTE7 237 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 RAB11FIP5Q9BXF6 653 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
BRAT1-203ENST00000467558 FADS3Q9Y5Q0 445 aa13.55□□□□□ -0.24
BRAT1-203ENST00000467558 MYL12BO14950 172 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 SERPINI2O75830 405 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 TGFBIQ15582 683 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 GPRC6AQ5T6X5 926 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 IKZF3Q9UKT9 509 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 DOCK2Q92608 1830 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 FYNP06241 537 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 ANKRD46Q86W74 232 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 TCEAL8Q8IYN2 117 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 CENPNQ96H22 339 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 EBPLQ9BY08 206 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 OR10H3O60404 316 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 DLG1Q12959 904 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 SEMA3AQ14563 771 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 FRMD7Q6ZUT3 714 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 GATAD2AQ86YP4 633 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 FAM47BQ8NA70 645 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 Q96MT0 163 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms