RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CCL27Q9Y4X3 112 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PCDHB14Q9Y5E9 798 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 MICAL3Q7RTP6 2002 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 TOR1BO14657 336 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 SNPHO15079 494 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 AXIN1O15169 862 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 ERN1O75460 977 aaKnown RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 CREG1O75629 220 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 IGFBP5P24593 272 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PPP3CCP48454 512 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 ZNF140P52738 457 aaPredicted RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 ERVPABLB-1P60509 514 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 VBP1P61758 197 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 IL5RAQ01344 420 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 TEKQ02763 1124 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PROX2Q3B8N5 592 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PARP15Q460N3 678 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 LRIF1Q5T3J3 769 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 SNX20Q7Z614 316 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PLD3Q8IV08 490 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 GALNT6Q8NCL4 622 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 FBXO30Q8TB52 745 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 RTP3Q9BQQ7 232 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 POLR1EQ9GZS1 481 aaKnown RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 CCDC90BQ9GZT6 254 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 SP110Q9HB58 689 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 IKZF3Q9UKT9 509 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 EIF3LQ9Y262 564 aaKnown RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 WDR47O94967 919 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 OR4F21O95013 312 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 F2P00734 622 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SMIM10L2AP0DMW4 78 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SMIM10L2BP0DMW5 78 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 PAGE2Q7Z2X7 111 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
CHD1L-205ENST00000467213 TMEM179BQ7Z7N9 219 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 GPSM1Q86YR5 675 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 TRPM4Q8TD43 1214 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 ZHX1-C8orf76Q96EF9 292 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 HMCESQ96FZ2 354 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SNX18Q96RF0 628 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 PLCXD1Q9NUJ7 323 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 RNF19AQ9NV58 838 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 GALPQ9UBC7 116 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 KCTD3Q9Y597 815 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 AP1M2Q9Y6Q5 423 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 DFNA5O60443 496 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SEC22BO75396 215 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 VPS26AO75436 327 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 NR4A1P22736 598 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 ADCYAP1R1P41586 468 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 RABGGTBP53611 331 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 IST1P53990 364 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 YBEYP58557 167 aaPredicted RBP15.28■□□□□ 0.04
CHD1L-205ENST00000467213 USP43Q70EL4 1123 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 C14orf80Q86SX3 495 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 FRS2Q8WU20 508 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 TMEM40Q8WWA1 233 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 ITPAQ9BY32 194 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 RETREG1Q9H6L5 497 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 OPTCQ9UBM4 332 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
CHD1L-205ENST00000467213 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.04
CHD1L-205ENST00000467213 CDC7O00311 574 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 TNFRSF10BO14763 440 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 ODC1P11926 461 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 PXNP49023 591 aaPredicted RBP15.27■□□□□ 0.04
CHD1L-205ENST00000467213 ARHGDIAP52565 204 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 GBX1Q14549 363 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 MAD2L1BPQ15013 274 aaPredicted RBP15.27■□□□□ 0.04
CHD1L-205ENST00000467213 SF3B4Q15427 424 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■■■■ 30.1
CHD1L-205ENST00000467213 CATSPEREQ5SY80 951 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 PGBD5Q8N414 524 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 OR10A6Q8NH74 314 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 CNIH3Q8TBE1 160 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 TRIB3Q96RU7 358 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 ACOX2Q99424 681 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 ALOXE3Q9BYJ1 711 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 NACA2Q9H009 215 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 PIF1Q9H611 641 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 CLMPQ9H6B4 373 aa15.27■□□□□ 0.04
CHD1L-205ENST00000467213 MYO16Q9Y6X6 1858 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 EFCAB9A8MZ26 197 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 J3KR12 359 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 SLC28A1O00337 649 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 WNT9AO14904 365 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 MUSKO15146 869 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 XPNPEP2O43895 674 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 CASP3P42574 277 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 ITKQ08881 620 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 MAPKAPK3Q16644 382 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 TTLL9Q3SXZ7 439 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 PIK3R6Q5UE93 754 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 MSANTD1Q6ZTZ1 278 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 SULF1Q8IWU6 871 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 MSRB3Q8IXL7 192 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 SLC7A5P1Q8MH63 180 aa15.27■□□□□ 0.03
CHD1L-205ENST00000467213 AMER2Q8N7J2 671 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms