RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 MAPK7Q13164 816 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 KRR1Q13601 381 aaKnown RBP9.29□□□□□ -0.92
SCAF11-205ENST00000465950 NFATC4Q14934 902 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 TPSAB1Q15661 275 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 C9orf50Q5SZB4 431 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 GK5Q6ZS86 529 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 SYT13Q7L8C5 426 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF100Q8IYN0 542 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 UBE2J2Q8N2K1 259 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 SPPL2AQ8TCT8 520 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 USP6NLQ92738 828 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 MOAP1Q96BY2 351 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 GORASP1Q9BQQ3 440 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 APOOQ9BUR5 198 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 ACAT2Q9BWD1 397 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 ZFP69BQ9UJL9 534 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 PSMD13Q9UNM6 376 aa9.29□□□□□ -0.92
SCAF11-205ENST00000465950 PRR33A8MZF0 331 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 LRP3O75074 770 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 RECQL5O94762 991 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 AP2A1O95782 977 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 TOP3BO95985 862 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ARCN1P48444 511 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 MAXP61244 160 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 HSF2Q03933 536 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 FOXD4Q12950 439 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 NFYCQ13952 458 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 DPYSL3Q14195 570 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 LHX8Q68G74 356 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 OPN5Q6U736 354 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 KIAA2013Q8IYS2 634 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 MAGEB18Q96M61 343 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 EIF3KQ9UBQ5 218 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 UPB1Q9UBR1 384 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 FANCGO15287 622 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 KLRC4O43908 158 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 CNOT3O75175 753 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 HSD17B3P37058 310 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 KHKP50053 298 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 EMP2P54851 167 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 GALK2Q01415 458 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 MTAPQ13126 283 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 C6orf15Q6UXA7 325 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 COX18Q8N8Q8 333 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 DACH2Q96NX9 599 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 FCRL5Q96RD9 977 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 POLE4Q9NR33 117 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PCYOX1Q9UHG3 505 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PRAMEF11O60813 436 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 DTNBO60941 627 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 GLSO94925 669 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 CLDN9O95484 217 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF8P17098 575 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 EPORP19235 508 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 GLRBP48167 497 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ERVFC1P60507 584 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 UBE2NP61088 152 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 TUBB3Q13509 450 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF234Q14588 700 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ZKSCAN8Q15776 578 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 RBMS3Q6XE24 437 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 KYAT3Q6YP21 454 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 MACC1Q6ZN28 852 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 IQCHQ86VS3 1027 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PEX13Q92968 403 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 VPS35Q96QK1 796 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 UTP23Q9BRU9 249 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 CRB3Q9BUF7 120 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 TMEM245Q9H330 911 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ANLNQ9NQW6 1124 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 STYXL1Q9Y6J8 313 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 YJEFN3A6XGL0 299 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 TRIM38O00635 465 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 STC2O76061 302 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 SEMA3DO95025 777 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF28P17035 718 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PCMT1P22061 227 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PTX3P26022 381 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 GSTM5P46439 218 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 PKNOX1P55347 436 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 NCF4Q15080 339 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 KCTD11Q693B1 232 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 CASP12Q6UXS9 341 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ZNF765Q7L2R6 523 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 TRPV1Q8NER1 839 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 OR4E2Q8NGC2 313 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 SCAMP5Q8TAC9 235 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 ACTRT1Q8TDG2 376 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 FKBP10Q96AY3 582 aa9.28□□□□□ -0.92
SCAF11-205ENST00000465950 EIF2B3Q9NR50 452 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 DNMT3BQ9UBC3 853 aaKnown RBP9.28□□□□□ -0.92
SCAF11-205ENST00000465950 MCTS1Q9ULC4 181 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms