RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 KRT87PA6NCN2 255 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 PFDN6O15212 129 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 CAPN5O15484 640 aaPredicted RBP11.36□□□□□ -0.59
CUX1-207ENST00000465461 ZW10O43264 779 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 KIF1CO43896 1103 aaKnown RBP11.36□□□□□ -0.59
CUX1-207ENST00000465461 GPC4O75487 556 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 AHSGP02765 367 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ESR1P03372 595 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 APOA4P06727 396 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GSTM1P09488 218 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 TPBGLP0DKB5 382 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ITIH1P19827 911 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 LIMK2P53671 638 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 EPHA4P54764 986 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GPX6P59796 221 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GABREP78334 506 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GPLD1P80108 840 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GSTM4Q03013 218 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 CUL1Q13616 776 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ACSBG2Q5FVE4 666 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 RBM20Q5T481 1227 aaKnown RBP11.36□□□□□ -0.59
CUX1-207ENST00000465461 UBAP2Q5T6F2 1119 aaKnown RBP11.36□□□□□ -0.59
CUX1-207ENST00000465461 TMEM71Q6P5X7 295 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 FBXO38Q6PIJ6 1188 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 FAM92BQ6ZTR7 304 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 OTOAQ7RTW8 1153 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 SLC22A15Q8IZD6 547 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 AVL9Q8NBF6 648 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 OR4D9Q8NGE8 314 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 OR52E1Q8NGJ3 308 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 GIMAP7Q8NHV1 300 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 CALML6Q8TD86 181 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ASZ1Q8WWH4 475 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
CUX1-207ENST00000465461 TMEM74Q96NL1 305 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 TGM7Q96PF1 710 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 PANX3Q96QZ0 392 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 KIR3DX1Q9H7L2 352 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 UCK1Q9HA47 277 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ZDHHC18Q9NUE0 388 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 ASF1AQ9Y294 204 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 MED16Q9Y2X0 877 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 PSAT1Q9Y617 370 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 NFS1Q9Y697 457 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 COLEC10Q9Y6Z7 277 aa11.36□□□□□ -0.59
CUX1-207ENST00000465461 OR6C74A6NCV1 312 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CXorf49A8MYA2 514 aaPredicted RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 E5RI56 91 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 F8W8V4 182 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 NDC80O14777 642 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 BRINP1O60477 761 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 SLCO2B1O94956 709 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 RHOXF2BP0C7M4 288 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 THRAP10827 490 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CCL4P13236 92 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CCKBRP32239 447 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 ETV5P41161 510 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 BDKRB1P46663 353 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CD151P48509 253 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CLCN7P51798 805 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 ADARP55265 1226 aaKnown RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 TIAL1Q01085 375 aaKnown RBP eCLIP11.35□□□□□ -0.59
CUX1-207ENST00000465461 CAV1Q03135 178 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 SQSTM1Q13501 440 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 TMED2Q15363 201 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CCSMST1Q4G0I0 132 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 DNTTIP2Q5QJE6 756 aaKnown RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 IRGCQ6NXR0 463 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 RAB11FIP2Q7L804 512 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 CNTN4Q8IWV2 1026 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 RBM12BQ8IXT5 1001 aaKnown RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 FBXO39Q8N4B4 442 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 ZBTB2Q8N680 514 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 ACVR1CQ8NER5 493 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 GSDMBQ8TAX9 411 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 SKA2Q8WVK7 121 aaPredicted RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 SEC14L1Q92503 715 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 RNF31Q96EP0 1072 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 PPM1MQ96MI6 270 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 GPR21Q99679 349 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 RHOXF2Q9BQY4 288 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 AARSD1Q9BTE6 412 aaKnown RBP11.35□□□□□ -0.59
CUX1-207ENST00000465461 NRSN2Q9GZP1 204 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 OCIAD1Q9NX40 245 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 MOCS1Q9NZB8 636 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 PISDQ9UG56 409 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 LOXL2Q9Y4K0 774 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 HEBP2Q9Y5Z4 205 aa11.35□□□□□ -0.59
CUX1-207ENST00000465461 KNTC1P50748 2209 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 CCDC187A0A096LP49 1063 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 TAF4O00268 1085 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 BTN3A3O00478 584 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 EIF3HO15372 352 aaKnown RBP eCLIP11.34□□□□□ -0.59
CUX1-207ENST00000465461 TNFSF15O95150 251 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 CAPNS1P04632 268 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 POLR2CP19387 275 aaPredicted RBP11.34□□□□□ -0.59
CUX1-207ENST00000465461 MAGEA4P43358 317 aa11.34□□□□□ -0.59
CUX1-207ENST00000465461 SEPHS1P49903 392 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms