RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS52-215ENST00000464425 BOP1Q14137 746 aaKnown RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 LONRF1Q17RB8 773 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 STEAP4Q687X5 459 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 PTRHD1Q6GMV3 140 aaKnown RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 MRNIPQ6NTE8 343 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 NEPROQ6NW34 567 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 PLXDC1Q8IUK5 500 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 LMNTD2Q8IXW0 634 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 ZBED8Q8IZ13 594 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS52-215ENST00000464425 PHC3Q8NDX5 983 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 FBXO36Q8NEA4 188 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 LKAAEAR1Q8TD35 194 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 PYROXD1Q8WU10 500 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 TMEM159Q96B96 161 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 ZNF578Q96N58 590 aaPredicted RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 TGM7Q96PF1 710 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 SAYSD1Q9NPB0 183 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 PDP2Q9P2J9 529 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 COLEC10Q9Y6Z7 277 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 UBA6A0AVT1 1052 aaPredicted RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 F8W8V4 182 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 LIN7AO14910 233 aaPredicted RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 HGSO14964 777 aaPredicted RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 CAPN5O15484 640 aaPredicted RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 TNFRSF8P28908 595 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 CCR7P32248 378 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 CSTF2P33240 577 aaKnown RBP eCLIP16.61■□□□□ 0.25
VPS52-215ENST00000464425 ETV5P41161 510 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 MAPK10P53779 464 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 CRYMQ14894 314 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 SYTL3Q4VX76 610 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 HP1BP3Q5SSJ5 553 aaPredicted RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 UNC5AQ6ZN44 842 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 ANKMY2Q8IV38 441 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.25
VPS52-215ENST00000464425 UBXN4Q92575 508 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 NAF1Q96HR8 494 aaKnown RBP16.61■□□□□ 0.25
VPS52-215ENST00000464425 FMO2Q99518 471 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 ANKZF1Q9H8Y5 726 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 THSD1Q9NS62 852 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 CHMP2BQ9UQN3 213 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 HEBP2Q9Y5Z4 205 aa16.61■□□□□ 0.25
VPS52-215ENST00000464425 SLC5A10A0PJK1 596 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 ITGA2BP08514 1039 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 F7P08709 466 aaPredicted RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 GSTA2P09210 222 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 FMO4P31512 558 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 MAGEA4P43358 317 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 CAPZBP47756 277 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 LEPRP48357 1165 aaKnown RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 CD151P48509 253 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 ERVPABLB-1P60509 514 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 HSPA14Q0VDF9 509 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 PRKG2Q13237 762 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 THOC5Q13769 683 aaKnown RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 FASTKD3Q14CZ7 662 aaKnown RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 IGF2-ASQ6U949 168 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 CYS1Q717R9 158 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 AGBL5Q8NDL9 886 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 CALML6Q8TD86 181 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 TFGQ92734 400 aaPredicted RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 USP7Q93009 1102 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 TCF12Q99081 682 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 TSSK1BQ9BXA7 367 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 P2RY12Q9H244 342 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 KIR3DX1Q9H7L2 352 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 PLAC1Q9HBJ0 212 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
VPS52-215ENST00000464425 OCIAD1Q9NX40 245 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 SLC24A2Q9UI40 661 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 NFU1Q9UMS0 254 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 CRYL1Q9Y2S2 319 aa16.6■□□□□ 0.25
VPS52-215ENST00000464425 EFCAB7A8K855 629 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 CDRT15L2A8MXV6 281 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 PFDN6O15212 129 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 FGF3P11487 239 aaPredicted RBP16.59■□□□□ 0.25
VPS52-215ENST00000464425 SLC5A2P31639 672 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 PPP1CAP62136 330 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 TYSND1Q2T9J0 566 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 ZNF470Q6ECI4 717 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 FAM92BQ6ZTR7 304 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 ARHGAP22Q7Z5H3 698 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 PDZD3Q86UT5 571 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 CCDC25Q86WR0 208 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 LRRC6Q86X45 466 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 FAM129CQ86XR2 697 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 CILP2Q8IUL8 1156 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 VRK3Q8IV63 474 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 PALM2Q8IXS6 379 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 OR4E2Q8NGC2 313 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 SNIP1Q8TAD8 396 aaKnown RBP16.59■□□□□ 0.25
VPS52-215ENST00000464425 GABPB2Q8TAK5 448 aaPredicted RBP16.59■□□□□ 0.25
VPS52-215ENST00000464425 ZFPM2Q8WW38 1151 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms