RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MIR1-1HGQ9H1L0 117 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ACTR3BQ9P1U1 418 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ERGIC3Q9Y282 383 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 DNAJC15Q9Y5T4 150 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 EIF2S1P05198 315 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 PABPC1P11940 636 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 PAICSP22234 425 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 SPAM1P38567 509 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SH3BP2P78314 561 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 FAM189BP81408 668 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 C2orf80Q0P641 193 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 TRAP1Q12931 704 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 CTC1Q2NKJ3 1217 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 UNC50Q53HI1 259 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ANKRD26P1Q6NSI1 321 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 NANOGP8Q6NSW7 305 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 RGMBQ6NW40 437 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 KBTBD6Q86V97 674 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ERI1Q8IV48 349 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 C7orf57Q8NEG2 295 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 KLHL32Q96NJ5 620 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 MCMBPQ9BTE3 642 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 NANOGQ9H9S0 305 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 KCTD5Q9NXV2 234 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CLEC4AQ9UMR7 237 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 HEMK1Q9Y5R4 338 aaPredicted RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 ST14Q9Y5Y6 855 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ANKRD66B4E2M5 251 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 TNFRSF11BO00300 401 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SOCS2O14508 198 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 GPR39O43194 453 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 DFNA5O60443 496 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 MAFKO60675 156 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ELFN1P0C7U0 828 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 UMPSP11172 480 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 GLDCP23378 1020 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 STC1P52823 247 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 PTPN5P54829 565 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 MANFP55145 182 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 CDH4P55283 916 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CDKL1Q00532 357 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 GANABQ14697 944 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 TGFBIQ15582 683 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ZNF423Q2M1K9 1284 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ZBED5Q49AG3 693 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 STEAP4Q687X5 459 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CERS6Q6ZMG9 384 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 MTSS1LQ765P7 747 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 RBM23Q86U06 439 aaKnown RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 OR5AK3PQ8NH89 298 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 FAM110BQ8TC76 370 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 TAMM41Q96BW9 452 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 C1GALT1C1Q96EU7 318 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SMOC2Q9H3U7 446 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 FAM124BQ9H5Z6 455 aaPredicted RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 TUBA8Q9NY65 449 aaPredicted RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 NUDT4Q9NZJ9 180 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SLC22A14Q9Y267 594 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 PCDHB1Q9Y5F3 818 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 TRBV23OR9-2A0A075B6M9 112 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 A0A0U1RQF3 1178 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 GLTPD2A6NH11 291 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 LOC110117498-PIK3R3F6TDL0 507 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 AIREO43918 545 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CYP2A6P11509 494 aaPredicted RBP8.92□□□□□ -0.98
HPS4-208ENST00000464362 CSKP41240 450 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SP3Q02447 781 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 PRKCZQ05513 592 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CHRNA6Q15825 494 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CYP27C1Q4G0S4 372 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 C6orf136Q5SQH8 315 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 OR52E8Q6IFG1 317 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SERPINA13PQ6UXR4 307 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 MBOAT1Q6ZNC8 495 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 LRRTM3Q86VH5 581 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 LEMD2Q8NC56 503 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 PIH1D2Q8WWB5 315 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 IL4I1Q96RQ9 567 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SMOXQ9NWM0 555 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 CLN6Q9NWW5 311 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 EBF1Q9UH73 591 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SPATA2Q9UM82 520 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SLC9A8Q9Y2E8 581 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 RNF11Q9Y3C5 154 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 ZNF451Q9Y4E5 1061 aa8.92□□□□□ -0.98
HPS4-208ENST00000464362 SMIM30A4D0T7 59 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SLC38A8A6NNN8 435 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 BOLA2-SMG1P6H3BVE0 249 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SNX4O95219 450 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 FABP3P05413 133 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 TALDO1P37837 337 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 FOXA1P55317 472 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 OR4D2P58180 307 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CSNK2BP67870 215 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 TAF1AQ15573 450 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms