RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RBM22Q9NW64 420 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 TAS2R13Q9NYV9 303 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ENOPH1Q9UHY7 261 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DSEQ9UL01 958 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 INTS6Q9UL03 887 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 RNF112Q9ULX5 631 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SAMD4AQ9UPU9 718 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 AFG3L2Q9Y4W6 797 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ANKRD36A6QL64 1941 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MIA3Q5JRA6 1907 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ATP6AP2A0A1C7CYW4 349 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ELOVL7A1L3X0 281 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM92AA1XBS5 289 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 LCHNA4D1U4 455 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 NEMP2A6NFY4 417 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CENPXA8MT69 81 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PDZK1P1A8MUH7 402 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 EFCAB9A8MZ26 197 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SUPT3HB4E1H0 165 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 DFFAO00273 331 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC28A1O00337 649 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 HAT1O14929 419 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ARHGEF9O43307 516 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 HS6ST1O60243 411 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MMP20O60882 483 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ERN1O75460 977 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ATP6AP2O75787 350 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 LRIG2O94898 1065 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 WISP3O95389 354 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CLIC3O95833 236 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 EPOP01588 193 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 FGF1P05230 155 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 RPS17P08708 135 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 INSRRP14616 1297 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CD1EP15812 388 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 HDCP19113 662 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 HLA-DPA1P20036 260 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CHRM3P20309 590 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 FUT4P22083 530 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 IGFBP5P24593 272 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PCSK1P29120 753 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 HOXC13P31276 330 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SHMT2P34897 504 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ETFBP38117 255 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 YAP1P46937 504 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PPP3CCP48454 512 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 WNT3AP56704 352 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ISL1P61371 349 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CD47Q08722 323 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ABRQ12979 859 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SELENBP1Q13228 472 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 KCNAB2Q13303 367 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CDK5R2Q13319 367 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SEMA3AQ14563 771 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF460Q14592 562 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MBTPS1Q14703 1052 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SMAD1Q15797 465 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ZIK1Q3SY52 487 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 FUT11Q495W5 492 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 TIGD2Q4W5G0 525 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 XKR7Q5GH72 579 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 XP32Q5T750 250 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 OTUD1Q5VV17 481 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CLEC6AQ6EIG7 209 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CAPN13Q6MZZ7 669 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 METTL2BQ6P1Q9 378 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ERICH5Q6P6B1 374 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SHQ1Q6PI26 577 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MSANTD1Q6ZTZ1 278 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PAGE2Q7Z2X7 111 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 KDELC2Q7Z4H8 507 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 TSPYL5Q86VY4 417 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MICU2Q8IYU8 434 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 POC5Q8NA72 575 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 OR7G1Q8NGA0 311 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ANGPTL6Q8NI99 470 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 PSMA8Q8TAA3 256 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 C9orf43Q8TAL5 461 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 BLOC1S5Q8TDH9 187 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ZFP90Q8TF47 636 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC22A17Q8WUG5 538 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 FAR1Q8WVX9 515 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CAPSLQ8WWF8 208 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC38A4Q969I6 547 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 LGALS12Q96DT0 336 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SMARCD1Q96GM5 515 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 CRELD1Q96HD1 420 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF300Q96RE9 604 aaPredicted RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF382Q96SR6 550 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 KATNAL1Q9BW62 490 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 ITPAQ9BY32 194 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 TKTL2Q9H0I9 626 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 SMG9Q9H0W8 520 aaKnown RBP7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 MINDY3Q9H8M7 445 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 NTN4Q9HB63 628 aa7.07□□□□□ -1.28
CLSTN1-204ENST00000464286 WDR6Q9NNW5 1121 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms