RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 FERD3LQ96RJ6 166 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 GPR21Q99679 349 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 NRTNQ99748 197 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 FUT8Q9BYC5 575 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-204ENST00000463908 CCDC68Q9H2F9 335 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 KCNK4Q9NYG8 393 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 KLHL42Q9P2K6 505 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.47■□□□□ 0.55
LMNB1-204ENST00000463908 ATXN7L1Q9ULK2 861 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-204ENST00000463908 VWA7Q9Y334 891 aa18.47■□□□□ 0.55
LMNB1-204ENST00000463908 V9GYY5 206 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-204ENST00000463908 FRYQ5TBA9 3013 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 E5RI56 91 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 IFRD1O00458 451 aaPredicted RBP18.46■□□□□ 0.55
LMNB1-204ENST00000463908 MT-CO3P00414 261 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 TPBGLP0DKB5 382 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 TNFRSF8P28908 595 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 FOXC1Q12948 553 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 SLMAPQ14BN4 828 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 EFTUD2Q15029 972 aaKnown RBP eCLIP18.46■□□□□ 0.55
LMNB1-204ENST00000463908 AMZ1Q400G9 498 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 HECTD2Q5U5R9 776 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 TMPRSS7Q7RTY8 843 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 RBM12BQ8IXT5 1001 aaKnown RBP18.46■□□□□ 0.55
LMNB1-204ENST00000463908 CD200R1Q8TD46 325 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 ZFPM2Q8WW38 1151 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 JPH3Q8WXH2 748 aaPredicted RBP18.46■□□□□ 0.55
LMNB1-204ENST00000463908 CDKL2Q92772 493 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 INPP5DQ92835 1189 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 ATXN7L3BQ96GX2 97 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 OLFM1Q99784 485 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 STN1Q9H668 368 aaKnown RBP18.46■□□□□ 0.55
LMNB1-204ENST00000463908 NSMCE4AQ9NXX6 385 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 OGFRQ9NZT2 677 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 COLEC10Q9Y6Z7 277 aa18.46■□□□□ 0.55
LMNB1-204ENST00000463908 RP1P56715 2156 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 LILRA5A6NI73 299 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 HYAL3O43820 417 aaPredicted RBP18.45■□□□□ 0.54
LMNB1-204ENST00000463908 FAM155BO75949 473 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 ACSL3O95573 720 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 HOXB3P14651 431 aaPredicted RBP18.45■□□□□ 0.54
LMNB1-204ENST00000463908 CD9P21926 228 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 STX2P32856 288 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 TMED2Q15363 201 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 ERCC6LQ2NKX8 1250 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 HES3Q5TGS1 186 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 CYHR1Q6ZMK1 362 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 ZNF574Q6ZN55 896 aaPredicted RBP18.45■□□□□ 0.54
LMNB1-204ENST00000463908 PIM3Q86V86 326 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 CTAGE3PQ8IX95 158 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 PPM1NQ8N819 430 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 GPATCH11Q8N954 259 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 OR5AR1Q8NGP9 310 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 CPNE1Q99829 537 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 KIR3DX1Q9H7L2 352 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 MVB12BQ9H7P6 319 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 SLC24A2Q9UI40 661 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 MTO1Q9Y2Z2 717 aaKnown RBP18.45■□□□□ 0.54
LMNB1-204ENST00000463908 HEBP2Q9Y5Z4 205 aa18.45■□□□□ 0.54
LMNB1-204ENST00000463908 CACNA1GO43497 2377 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 FAM149AA5PLN7 773 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 VPS26AO75436 327 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 FDXRP22570 491 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 PDX1P52945 283 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 EPHA4P54764 986 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 PRKG2Q13237 762 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 PAQR3Q6TCH7 311 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 TMPRSS12Q86WS5 348 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 CACTIN-AS1Q8N1I8 211 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 WDR48Q8TAF3 677 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 GFM1Q96RP9 751 aaKnown RBP18.44■□□□□ 0.54
LMNB1-204ENST00000463908 NUDT22Q9BRQ3 303 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 RHOJQ9H4E5 214 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 RDH14Q9HBH5 336 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 CORO1CQ9ULV4 474 aaPredicted RBP18.44■□□□□ 0.54
LMNB1-204ENST00000463908 RUVBL2Q9Y230 463 aaKnown RBP18.44■□□□□ 0.54
LMNB1-204ENST00000463908 ASF1AQ9Y294 204 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 NFS1Q9Y697 457 aa18.44■□□□□ 0.54
LMNB1-204ENST00000463908 FAM221BA6H8Z2 402 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 MATN4O95460 622 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 TYRP1P17643 537 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 SPINK2P20155 84 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 MCM3P25205 808 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 NDUFS1P28331 727 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 ATP5DP30049 168 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 CSF2RBP32927 897 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 PHBP35232 272 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 GP5P40197 560 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 SKIV2L2P42285 1042 aaKnown RBP18.43■□□□□ 0.54
LMNB1-204ENST00000463908 PMS2P54278 862 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 VSNL1P62760 191 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 GPLD1P80108 840 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 TARDBPQ13148 414 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■■□ 19.3
LMNB1-204ENST00000463908 SPIDRQ14159 915 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 GRB7Q14451 532 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 KRT33BQ14525 404 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 KLHL38Q2WGJ6 581 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 TMEM207Q6UWW9 146 aa18.43■□□□□ 0.54
LMNB1-204ENST00000463908 CPNE9Q8IYJ1 553 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms