RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 CELSR3Q9NYQ7 3312 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 CCDC162PA2VCL2 907 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 OR6C74A6NCV1 312 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 CASC3O15234 703 aaKnown RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 FKBP9O95302 570 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 SEPHS1P49903 392 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 GFERP55789 205 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 CCZ1BP86790 482 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 TUBB3Q13509 450 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 LMNTD2Q8IXW0 634 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 D2HGDHQ8N465 521 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 RSC1A1Q92681 617 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 DPH2Q9BQC3 489 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 RAB11FIP5Q9BXF6 653 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 OR52A5Q9H2C5 316 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 INTS7Q9NVH2 962 aaKnown RBP13.09□□□□□ -0.31
COMMD3-205ENST00000463688 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 BPTFQ12830 3046 aa13.09□□□□□ -0.31
COMMD3-205ENST00000463688 GSAPA4D1B5 854 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
COMMD3-205ENST00000463688 GPR39O43194 453 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 GOT2P00505 430 aaKnown RBP13.08□□□□□ -0.32
COMMD3-205ENST00000463688 TCP1P17987 556 aaKnown RBP13.08□□□□□ -0.32
COMMD3-205ENST00000463688 CDH3P22223 829 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 FOXN2P32314 431 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 CCR10P46092 362 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
COMMD3-205ENST00000463688 FNTAP49354 379 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 OLIG2Q13516 323 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 TGIF1Q15583 401 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 FAM182AQ5T1J6 154 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 PCGF5Q86SE9 256 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 OR4E2Q8NGC2 313 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 OR13J1Q8NGT2 312 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 TTC9Q92623 222 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 SLC7A5P2Q9GIP4 190 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 FGF21Q9NSA1 209 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 KCND1Q9NSA2 647 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
COMMD3-205ENST00000463688 A0A0U1RQJ8 604 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SDR42E2A6NKP2 422 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SMAPO00193 183 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 AGRPO00253 132 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SGTAO43765 313 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CPNE3O75131 537 aaKnown RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SPAG6O75602 509 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CCNFP41002 786 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 STAT5AP42229 794 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 MAGEA6P43360 314 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 ADARP55265 1226 aaKnown RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 RPS15P62841 145 aaKnown RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 BOP1Q14137 746 aaKnown RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 KIR2DS3Q14952 304 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 UNC5DQ6UXZ4 953 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 ZNF605Q86T29 641 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 GPR135Q8IZ08 494 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 RASGEF1CQ8N431 466 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 TAB3Q8N5C8 712 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CLDN19Q8N6F1 224 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 MCUQ8NE86 351 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 OR5K2Q8NHB8 316 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CALML6Q8TD86 181 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CPT1BQ92523 772 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 TCTN2Q96GX1 697 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 LRFN5Q96NI6 719 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 CTRCQ99895 268 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SPRY4Q9C004 299 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 FAM8A1Q9UBU6 413 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 LNPEPQ9UIQ6 1025 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-205ENST00000463688 AP1M2Q9Y6Q5 423 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
COMMD3-205ENST00000463688 SPTA1P02549 2419 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 PIPSLA2A3N6 862 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 DLGAP3O95886 979 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 ESR1P03372 595 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 TCN2P20062 427 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.32
COMMD3-205ENST00000463688 PREPP48147 710 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 GPS1Q13098 491 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 SIX1Q15475 284 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-205ENST00000463688 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
COMMD3-205ENST00000463688 CASC4Q6P4E1 433 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms