RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SRSF4Q08170 494 aaKnown RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 KIF5AQ12840 1032 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 FOXF2Q12947 444 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 NME3Q13232 169 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 TUBB3Q13509 450 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 BOP1Q14137 746 aaKnown RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 HABP2Q14520 560 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 MSANTD2Q6P1R3 559 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 C14orf80Q86SX3 495 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 TMEM25Q86YD3 366 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 SCML4Q8N228 414 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 TERB1Q8NA31 727 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 RAPGEF5Q92565 580 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 CENPIQ92674 756 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 SCAMP4Q969E2 229 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 TRIM44Q96DX7 344 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 MED8Q96G25 268 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 SLC39A13Q96H72 371 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 HIC2Q96JB3 615 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 VCPIP1Q96JH7 1222 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 HAPLN3Q96S86 360 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 SNRNP25Q9BV90 132 aaKnown RBP3.66□□□□□ -1.82
SCFD1-204ENST00000463622 ZWILCHQ9H900 591 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 PARVAQ9NVD7 372 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 ASNSD1Q9NWL6 643 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 ETAA1Q9NY74 926 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 CFAP97Q9P2B7 532 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 UVRAGQ9P2Y5 699 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 RASAL2Q9UJF2 1139 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 CEP83Q9Y592 693 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 CPQQ9Y646 472 aa3.66□□□□□ -1.82
SCFD1-204ENST00000463622 ANAPC1Q9H1A4 1944 aa3.65□□□□□ -1.82
SCFD1-204ENST00000463622 KIF26AQ9ULI4 1882 aaPredicted RBP3.65□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF638Q14966 1978 aaKnown RBP3.65□□□□□ -1.82
SCFD1-204ENST00000463622 PYCARD-AS1I3L0S3 204 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 DFNA5O60443 496 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 HSF2BPO75031 334 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 MOCS2O96007 188 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 IGLV3-27P01718 113 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 AHSGP02765 367 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 MYBL1P10243 752 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 IL4RP24394 825 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 PTPN9P43378 593 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 CSNK1EP49674 416 aaKnown RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 TPMTP51580 245 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 EIF2B5Q13144 721 aaKnown RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ILKQ13418 452 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 TBC1D25Q3MII6 688 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 C10orf120Q5SQS8 335 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 C10orf76Q5T2E6 689 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 SNX30Q5VWJ9 437 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 C11orf63Q6NUN7 778 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 DCUN1D2Q6PH85 259 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 DAAM2Q86T65 1068 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF683Q8IZ20 524 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ZCCHC9Q8N567 271 aaKnown RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 NIPA2Q8N8Q9 360 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 OR52K2Q8NGK3 314 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 IRGQQ8WZA9 623 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 IGSF8Q969P0 613 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 HES6Q96HZ4 224 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 MS4A14Q96JA4 679 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 PRICKLE1Q96MT3 831 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 TIMP4Q99727 224 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 FAM118BQ9BPY3 351 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 GPR174Q9BXC1 333 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ACTRT3Q9BYD9 372 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 AMBRA1Q9C0C7 1298 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 DNAI2Q9GZS0 605 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 C10orf88Q9H8K7 445 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 POPDC2Q9HBU9 364 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 SPHK2Q9NRA0 654 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 KLC4Q9NSK0 619 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ETNK2Q9NVF9 386 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 DDIT4Q9NX09 232 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.65□□□□□ -1.83
SCFD1-204ENST00000463622 WDR35Q9P2L0 1181 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 CLEC4EQ9ULY5 219 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 ANKRD6Q9Y2G4 727 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 SLCO1B1Q9Y6L6 691 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 MYH10P35580 1976 aa3.65□□□□□ -1.83
SCFD1-204ENST00000463622 A0A1B0GTQ1 180 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CCDC151A5D8V7 595 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CGB1A6NKQ9 187 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 KCNU1A8MYU2 1149 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 C10orf142B7Z368 130 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 WASH3PC4AMC7 463 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ALG1L2C9J202 215 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 E7ENX8 843 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MYO1FO00160 1098 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ZSCAN12O43309 604 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 KRT86O43790 486 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CACNG3O60359 315 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CNTN5O94779 1100 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RTN3O95197 1032 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 IPO7O95373 1038 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 KRT10P13645 584 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms