RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 EIF3LQ9Y262 564 aaKnown RBP8.57□□□□□ -1.04
SHQ1-203ENST00000463369 PMF1-BGLAPU3KQ54 211 aa8.57□□□□□ -1.04
SHQ1-203ENST00000463369 COL4A6Q14031 1691 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 MYO18AQ92614 2054 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 A0A1W2PQU0 124 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 DLX3O60479 287 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 NPHS1O60500 1241 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 EFCAB14O75071 495 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 POMCP01189 267 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 HTR1AP08908 422 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 GFAPP14136 432 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ITIH1P19827 911 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 NR2C2P49116 596 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ALDH7A1P49419 539 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 CSRP3P50461 194 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 GNG2P59768 71 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 GBE1Q04446 702 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 CDO1Q16878 200 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 DPY19L1Q2PZI1 675 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF667Q5HYK9 610 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 NOMO2Q5JPE7 1267 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 FAM102AQ5T9C2 384 aaPredicted RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 BSPRYQ5W0U4 402 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 SCYL2Q6P3W7 929 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 TBPL2Q6SJ96 375 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 THAP5Q7Z6K1 395 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 LYSMD2Q8IV50 215 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 FAM20CQ8IXL6 584 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 CCDC116Q8IYX3 515 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ASCC1Q8N9N2 400 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 COLGALT1Q8NBJ5 622 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 PAPD5Q8NDF8 572 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 SIMC1Q8NDZ2 872 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ACVR1CQ8NER5 493 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ANGPTL6Q8NI99 470 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 PHF10Q8WUB8 498 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 SLC22A17Q8WUG5 538 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 BADQ92934 168 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 AHCYL2Q96HN2 611 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 QKIQ96PU8 341 aaKnown RBP eCLIP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 SNX18Q96RF0 628 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 AGAP2Q99490 1192 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 TREX2Q9BQ50 279 aaPredicted RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF670Q9BS34 389 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 DGCR6LQ9BY27 220 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 ADNPQ9H2P0 1102 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 GOLGA2P5Q9HBQ8 144 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 LRRC4Q9HBW1 653 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 HPS4Q9NQG7 708 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 SLCO3A1Q9UIG8 710 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 TLK1Q9UKI8 766 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 RUVBL2Q9Y230 463 aaKnown RBP8.56□□□□□ -1.04
SHQ1-203ENST00000463369 UGT2A1Q9Y4X1 527 aa8.56□□□□□ -1.04
SHQ1-203ENST00000463369 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ZNF487B1APH4 448 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 TAF4O00268 1085 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PPEF2O14830 753 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 SOCS5O75159 536 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 UPK1BO75841 260 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GABARAPO95166 117 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CSTBP04080 98 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 KRT8P05787 483 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 F7P08709 466 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ACRP10323 421 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PNPLA4P41247 253 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 MTHFRP42898 656 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ABCG1P45844 678 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 P2RX3P56373 397 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PPIGQ13427 754 aaKnown RBP eCLIP8.55□□□□□ -1.048e-7■■■□□ 14.9
SHQ1-203ENST00000463369 TUSC3Q13454 348 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PRPSAP1Q14558 356 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CA9Q16790 459 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GEN1Q17RS7 908 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ADPRMQ3LIE5 342 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 RSBN1Q5VWQ0 802 aaPredicted RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 RAB12Q6IQ22 244 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 PRMT9Q6P2P2 845 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 SCARA5Q6ZMJ2 495 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 GALNT7Q86SF2 657 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ADCK1Q86TW2 530 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CMIPQ8IY22 773 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 C19orf47Q8N9M1 422 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 AVL9Q8NBF6 648 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 RASSF5Q8WWW0 418 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 SPATA13Q96N96 652 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 TSNARE1Q96NA8 513 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CASD1Q96PB1 797 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 MCMBPQ9BTE3 642 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 SORBS1Q9BX66 1292 aaKnown RBP8.55□□□□□ -1.04
SHQ1-203ENST00000463369 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 DMRT3Q9NQL9 472 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 NECTIN3Q9NQS3 549 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 CHRAC1Q9NRG0 131 aa8.55□□□□□ -1.04
SHQ1-203ENST00000463369 C14orf119Q9NWQ9 140 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms