RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MMRN1Q13201 1228 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 NFE2L1Q14494 772 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 ATP13A5Q4VNC0 1218 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 IRAK1BP1Q5VVH5 260 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 B3GNTL1Q67FW5 361 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-202ENST00000461127 FCRL6Q6DN72 434 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 FAM180AQ6UWF9 173 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 PARP9Q8IXQ6 854 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 GPR135Q8IZ08 494 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 NXPE1Q8N323 547 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 DNAJB14Q8TBM8 379 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-202ENST00000461127 C12orf66Q96MD2 445 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 PPM1MQ96MI6 270 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 SRPK1Q96SB4 655 aaKnown RBP16.71■□□□□ 0.27
TOP3A-202ENST00000461127 ISCUQ9H1K1 167 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 KIR3DX1Q9H7L2 352 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 NDOR1Q9UHB4 597 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 SLC24A2Q9UI40 661 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 POMT2Q9UKY4 750 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 INTUQ9ULD6 942 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 AIMP2Q13155 320 aaKnown RBP16.7■□□□□ 0.26
TOP3A-202ENST00000461127 KRT33BQ14525 404 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 HIF1AQ16665 826 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 NCBP2-AS2Q69YL0 99 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 TXNRD3NBQ6F5E7 133 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 FAM83HQ6ZRV2 1179 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-202ENST00000461127 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 N4BP2L2Q92802 583 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-202ENST00000461127 PTERQ96BW5 349 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 PACSIN1Q9BY11 444 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 TSGA10Q9BZW7 698 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 TRMT1Q9NXH9 659 aaKnown RBP16.7■□□□□ 0.26
TOP3A-202ENST00000461127 SUCOQ9UBS9 1254 aaKnown RBP16.7■□□□□ 0.26
TOP3A-202ENST00000461127 TMPRSS11EQ9UL52 423 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 COLEC10Q9Y6Z7 277 aa16.7■□□□□ 0.26
TOP3A-202ENST00000461127 AKAP9Q99996 3911 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 GSAPA4D1B5 854 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 SNRPB2P08579 225 aaKnown RBP16.69■□□□□ 0.26
TOP3A-202ENST00000461127 TMEM253P0C7T8 217 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 NDUFS1P28331 727 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 PBLDP30039 288 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-202ENST00000461127 ZNF169Q14929 603 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-202ENST00000461127 VWA2Q5GFL6 755 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 LDLRAP1Q5SW96 308 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 ZFYVE27Q5T4F4 411 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 METRNLQ641Q3 311 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 ZNF385CQ66K41 422 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-202ENST00000461127 TMEM220Q6QAJ8 160 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 OR4E2Q8NGC2 313 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 OR2Y1Q8NGV0 311 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 RELTQ969Z4 430 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 CNDP1Q96KN2 507 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 TRIB3Q96RU7 358 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 INSM2Q96T92 566 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-202ENST00000461127 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 ACSL5Q9ULC5 683 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 CSAG2Q9Y5P2 127 aa16.69■□□□□ 0.26
TOP3A-202ENST00000461127 OR2AG2A6NM03 316 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 JRKO75564 520 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 SLC35G4P0C7Q5 338 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 LMAN1P49257 510 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 CTSCP53634 463 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
TOP3A-202ENST00000461127 TLR1Q15399 786 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 AGAP7PQ5VUJ5 663 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 ZDHHC20Q5W0Z9 365 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 DUS1LQ6P1R4 473 aaKnown RBP16.68■□□□□ 0.26
TOP3A-202ENST00000461127 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-202ENST00000461127 BCORP1Q8N888 145 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 RASGEF1AQ8N9B8 481 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 HDAC11Q96DB2 347 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 AGAP4Q96P64 663 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 SLX1AQ9BQ83 275 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 EPS8L2Q9H6S3 715 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 BPIFA1Q9NP55 256 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 LZTFL1Q9NQ48 299 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 OLAHQ9NV23 265 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 IFT80Q9P2H3 777 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-202ENST00000461127 AP1M2Q9Y6Q5 423 aa16.68■□□□□ 0.26
TOP3A-202ENST00000461127 DCHS2Q6V1P9 2916 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 PCNX1Q96RV3 2341 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 ANKRD12Q6UB98 2062 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 AGPSO00116 658 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 KCNK1O00180 336 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 PJA2O43164 708 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 CD48P09326 243 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 HTR1EP28566 365 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
TOP3A-202ENST00000461127 NAP1L1P55209 391 aaKnown RBP16.67■□□□□ 0.26
TOP3A-202ENST00000461127 DCDP81605 110 aaKnown RBP16.67■□□□□ 0.26
TOP3A-202ENST00000461127 OTUD4Q01804 1114 aaKnown RBP16.67■□□□□ 0.26
TOP3A-202ENST00000461127 PCSK7Q16549 785 aa16.67■□□□□ 0.26
TOP3A-202ENST00000461127 HADHQ16836 314 aaKnown RBP16.67■□□□□ 0.26
TOP3A-202ENST00000461127 LONRF2Q1L5Z9 754 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms