RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 BCCIPQ9P287 314 aaKnown RBP eCLIP3.22□□□□□ -1.89
RFC4-211ENST00000460408 DDX25Q9UHL0 483 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
RFC4-211ENST00000460408 BAZ1BQ9UIG0 1483 aaKnown RBP3.22□□□□□ -1.89
RFC4-211ENST00000460408 SOS1Q07889 1333 aaPredicted RBP3.21□□□□□ -1.89
RFC4-211ENST00000460408 A0A0B4J293 547 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 EDDM13A0A1B0GTR0 161 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 A0A1W2PS18 150 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ELOVL7A1L3X0 281 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 PTGESO14684 152 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 BAG4O95429 457 aaKnown RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 IGHV4-39P01824 125 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 OR2T7P0C7T2 308 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 NR1D1P20393 614 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ZNF41P51814 821 aaPredicted RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 RALGDSQ12967 914 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 GAGE5Q13069 117 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 GAGE6Q13070 117 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ASIC2Q16515 512 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 KRBOX4Q5JUW0 171 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 C6orf163Q5TEZ5 329 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 CAPRIN2Q6IMN6 1127 aaKnown RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 KLC3Q6P597 504 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 SPSB3Q6PJ21 355 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 PACS1Q6VY07 963 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 FOXL2NBQ6ZUU3 175 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 KRT77Q7Z794 578 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 CENPVQ7Z7K6 275 aaPredicted RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 MAML2Q8IZL2 1156 aaPredicted RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 NR4A3Q92570 626 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 C17orf77Q96MU5 243 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ZMAT2Q96NC0 199 aaKnown RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 LRRC3BQ96PB8 259 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 BTBD10Q9BSF8 475 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 LRRC1Q9BTT6 524 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 POLR3CQ9BUI4 534 aaPredicted RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 WNT5BQ9H1J7 359 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 TBC1D17Q9HA65 648 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ZCCHC17Q9NP64 241 aaKnown RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 PIH1D3Q9NQM4 214 aaKnown RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 POU2F3Q9UKI9 436 aa3.21□□□□□ -1.9
RFC4-211ENST00000460408 ZHX1Q9UKY1 873 aaPredicted RBP3.21□□□□□ -1.9
RFC4-211ENST00000460408 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 TRIM77I1YAP6 450 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 SYNGR3O43761 229 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 EIF5BO60841 1220 aaKnown RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 CTSVO60911 334 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 GAS8-AS1O95177 125 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 CELF2O95319 508 aaKnown RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 APOA4P06727 396 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 KRT19P08727 400 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 CCDC175P0C221 793 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ACP2P11117 423 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 CBLP22681 906 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 DGKAP23743 735 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 MATR3P43243 847 aaKnown RBP eCLIP3.2□□□□□ -1.9
RFC4-211ENST00000460408 MBTD1Q05BQ5 628 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 HSPB3Q12988 150 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 PLA2G7Q13093 441 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 COG2Q14746 738 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 VWC2Q2TAL6 325 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 SIRPB2Q5JXA9 342 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ARMC4Q5T2S8 1044 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 NDUFAF5Q5TEU4 345 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 IRAK1BP1Q5VVH5 260 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ZNF852Q6ZMS4 543 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 SLFN11Q7Z7L1 901 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 SLC9B2Q86UD5 537 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 LONP2Q86WA8 852 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 CIARTQ8N365 385 aaPredicted RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 RFLNBQ8N5W9 214 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 CPSF7Q8N684 471 aaKnown RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 NKAIN3Q8N8D7 197 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 RDM1Q8NG50 284 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ZNF653Q96CK0 615 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 HDAC11Q96DB2 347 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 MTERF3Q96E29 417 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 SPDL1Q96EA4 605 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 LMF2Q9BU23 707 aaKnown RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 FNDC11Q9BVV2 318 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ARRDC1-AS1Q9H2J1 176 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ACKR4Q9NPB9 350 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 ABCF3Q9NUQ8 709 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 TUBE1Q9UJT0 475 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 GRIP1Q9Y3R0 1128 aa3.2□□□□□ -1.9
RFC4-211ENST00000460408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.2□□□□□ -1.93e-6■□□□□ 9.4
RFC4-211ENST00000460408 SPIN1Q9Y657 262 aaPredicted RBP3.2□□□□□ -1.9
RFC4-211ENST00000460408 TOP2BQ02880 1626 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 CHD1O14646 1710 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 A0A1W2PPI3 338 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 PRR32B1ATL7 298 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 TSPAN1O60635 241 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 RECQL5O94762 991 aaPredicted RBP3.19□□□□□ -1.9
RFC4-211ENST00000460408 WDPCPO95876 746 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 H1F0P07305 194 aaKnown RBP3.19□□□□□ -1.9
RFC4-211ENST00000460408 QDPRP09417 244 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 CYP11B2P19099 503 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 IL15P40933 162 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms