RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	AARSD1	Q9BTE6	412 aa	Known RBP	10	□□□□□ -0.81
MRPL55-223	ENST00000459783	HGH1	Q9BTY7	390 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PHACTR1	Q9C0D0	580 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	KIR3DX1	Q9H7L2	352 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	VPS37B	Q9H9H4	285 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	LRRC4C	Q9HCJ2	640 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	LATS2	Q9NRM7	1088 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PDP2	Q9P2J9	529 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TSR3	Q9UJK0	312 aa	Known RBP	10	□□□□□ -0.81
MRPL55-223	ENST00000459783	NFS1	Q9Y697	457 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PIKFYVE	Q9Y2I7	2098 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	TPR	P12270	2363 aa	Known RBP	9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	NDC80	O14777	642 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	KIF1C	O43896	1103 aa	Known RBP	9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	UBXN7	O94888	489 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	PROS1	P07225	676 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	RHOXF2B	P0C7M4	288 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	THRA	P10827	490 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	HGF	P14210	728 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CCKBR	P32239	447 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CAPZB	P47756	277 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	LIMK2	P53671	638 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	INHBC	P55103	352 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	GPLD1	P80108	840 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CAV1	Q03135	178 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	MGAT5	Q09328	741 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	PRKG2	Q13237	762 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	BIRC2	Q13490	618 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CUL1	Q13616	776 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	EFTUD2	Q15029	972 aa	Known RBP eCLIP	9.99	□□□□□ -0.81	3e-17	■■■■■ 50.9
MRPL55-223	ENST00000459783	MAP9	Q49MG5	647 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CCSMST1	Q4G0I0	132 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	SYTL3	Q4VX76	610 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	GLE1	Q53GS7	698 aa	Known RBP	9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	GALNT7	Q86SF2	657 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	RASGRP3	Q8IV61	690 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	ZBTB2	Q8N680	514 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	RCBTB1	Q8NDN9	531 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	OR52E1	Q8NGJ3	308 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	WDR48	Q8TAF3	677 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CALML6	Q8TD86	181 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	ASZ1	Q8WWH4	475 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	KCNJ9	Q92806	393 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	TMEM159	Q96B96	161 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	SH3KBP1	Q96B97	665 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CCDC74B	Q96LY2	380 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	PPM1M	Q96MI6	270 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	DEPDC7	Q96QD5	511 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	FERD3L	Q96RJ6	166 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	GPR21	Q99679	349 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	OLFM1	Q99784	485 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	RHOXF2	Q9BQY4	288 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	MENT	Q9BUN1	341 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	TWSG1	Q9GZX9	223 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	XKR8	Q9H6D3	395 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	FAM114A2	Q9NRY5	505 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	NINJ2	Q9NZG7	142 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	CIDEB	Q9UHD4	219 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	PLAGL1	Q9UM63	463 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	ICK	Q9UPZ9	632 aa		9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	MN1	Q10571	1320 aa	Predicted RBP	9.99	□□□□□ -0.81
MRPL55-223	ENST00000459783	FAM159B	A6NKW6	160 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	BTN3A3	O00478	584 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	DUX1	O43812	170 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	C9	P02748	559 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	MPO	P05164	745 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	APOA4	P06727	396 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	MYBL2	P10244	700 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	CHRM3	P20309	590 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	DEK	P35659	375 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	ETV5	P41161	510 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	BDKRB1	P46663	353 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	ABR	Q12979	859 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	KYNU	Q16719	465 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	PLEKHS1	Q5SXH7	462 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	TMEM71	Q6P5X7	295 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	FBXO38	Q6PIJ6	1188 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	WDR74	Q6RFH5	385 aa	Predicted RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	CYHR1	Q6ZMK1	362 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	KIAA0408	Q6ZU52	694 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	OTOA	Q7RTW8	1153 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	ARHGAP22	Q7Z5H3	698 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	ZC3HC1	Q86WB0	502 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	RBM12B	Q8IXT5	1001 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	AVL9	Q8NBF6	648 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	OR4D9	Q8NGE8	314 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	OR10G6	Q8NH81	332 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	MDM1	Q8TC05	714 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	IFT81	Q8WYA0	676 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	NCSTN	Q92542	709 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	PMEPA1	Q969W9	287 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	LIN37	Q96GY3	246 aa	Predicted RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	PANX3	Q96QZ0	392 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	STN1	Q9H668	368 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	MVB12B	Q9H7P6	319 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	PPAN	Q9NQ55	473 aa	Known RBP	9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	SATB2	Q9UPW6	733 aa		9.98	□□□□□ -0.81
MRPL55-223	ENST00000459783	ASF1A	Q9Y294	204 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms