RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CSRP3P50461 194 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 RAB10P61026 200 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 CDK3Q00526 305 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TMEM115Q12893 351 aaPredicted RBP10.14□□□□□ -0.79
USP39-210ENST00000459775 ST3GAL2Q16842 350 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 ZDHHC20Q5W0Z9 365 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 KIAA1161Q6NSJ0 714 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 CORO6Q6QEF8 472 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 CERS6Q6ZMG9 384 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TIFABQ6ZNK6 161 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 ADGRG6Q86SQ4 1221 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TMEFF1Q8IYR6 380 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 CENPLQ8N0S6 344 aaPredicted RBP10.14□□□□□ -0.79
USP39-210ENST00000459775 RBFAQ8N0V3 343 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TCP10LQ8TDR4 215 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP39-210ENST00000459775 NXNL1Q96CM4 212 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 MOCOSQ96EN8 888 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 BMFQ96LC9 184 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 SMC6Q96SB8 1091 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 FAM126AQ9BYI3 521 aaPredicted RBP10.14□□□□□ -0.79
USP39-210ENST00000459775 TMEM216Q9P0N5 145 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 SCHIP1Q9P0W5 487 aaPredicted RBP10.14□□□□□ -0.79
USP39-210ENST00000459775 GRID1Q9ULK0 1009 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
USP39-210ENST00000459775 PLXNA2O75051 1894 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 IGLV3-16A0A075B6K0 115 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 WDR91A4D1P6 747 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 H3BMM5 538 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 IL33O95760 270 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 IGLV3-19P01714 112 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CCDC166P0CW27 439 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 ATP1B2P14415 290 aaPredicted RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 ZNF7P17097 686 aaPredicted RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 MSH3P20585 1137 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 MAGEA12P43365 314 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 HTR3AP46098 478 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SERPINB8P50452 374 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 C21orf58P58505 322 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 B2MP61769 119 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 PHEXP78562 749 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SLC18A2Q05940 514 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 FAPQ12884 760 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CSHL1Q14406 222 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 LRRC23Q53EV4 343 aaPredicted RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 ZNF765Q7L2R6 523 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 ZER1Q7Z7L7 766 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 GALNT7Q86SF2 657 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CROCCP2Q86T23 111 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 VRK3Q8IV63 474 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CPNE9Q8IYJ1 553 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 DDHD1Q8NEL9 900 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 FOXJ1Q92949 421 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SDCCAG3Q96C92 435 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 MTBPQ96DY7 904 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 HIC2Q96JB3 615 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CNDP1Q96KN2 507 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SGK2Q9HBY8 427 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 GPAMQ9HCL2 828 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 NFKBIL1Q9UBC1 381 aaPredicted RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 MCM8Q9UJA3 840 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 EMCNQ9ULC0 261 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 PLEKHM1Q9Y4G2 1056 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 PLXNB3Q9ULL4 1909 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 KRT87PA6NCN2 255 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 COPEO14579 308 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 AXIN1O15169 862 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 ZBTB14O43829 449 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CDK14O94921 469 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 PSMA4P25789 261 aaKnown RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 CNTFP26441 200 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CCR7P32248 378 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 GCKP35557 465 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 NSG1P42857 185 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 KCNC1P48547 511 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CLCN7P51798 805 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SLC12A2P55011 1212 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 PPP2R2AP63151 447 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 POU4F1Q01851 419 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CSTF1Q05048 431 aaKnown RBP10.13□□□□□ -0.79
USP39-210ENST00000459775 LRP8Q14114 963 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 TMEM220Q6QAJ8 160 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 ZNF547Q8IVP9 402 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 TBC1D21Q8IYX1 336 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SUMF1Q8NBK3 374 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 CD200R1Q8TD46 325 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 HEXDCQ8WVB3 486 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 EEF1AKMT1Q8WVE0 214 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 PPP1R14BQ96C90 147 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 DCUN1D1Q96GG9 259 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 FAM111AQ96PZ2 611 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 VPS35Q96QK1 796 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 C19orf43Q9BQ61 176 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 WDR26Q9H7D7 661 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 RAD18Q9NS91 495 aa10.13□□□□□ -0.79
USP39-210ENST00000459775 SMOXQ9NWM0 555 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms