RNA–Protein interactions for RNA: ENST00000458550.5

PRRC2B-207, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 899 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-207ENST00000458550 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 FAM26EQ8N5C1 309 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 N4BP2L2Q92802 583 aaPredicted RBP13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 GORASP1Q9BQQ3 440 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 ING2Q9H160 280 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 MVB12BQ9H7P6 319 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 COG4Q9H9E3 785 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 ZDHHC3Q9NYG2 299 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 POMT2Q9UKY4 750 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
PRRC2B-207ENST00000458550 AGAP14A8MT82 685 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 CCL22O00626 93 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 PJA2O43164 708 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 SGTAO43765 313 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 RAB40ALP0C0E4 278 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 PTPN7P35236 360 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 CD151P48509 253 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 ZNF140P52738 457 aaPredicted RBP13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 PLEKHS1Q5SXH7 462 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 ARHGEF18Q6ZSZ5 1173 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 DSELQ8IZU8 1212 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 ENDOVQ8N8Q3 282 aaKnown RBP13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 LRFN5Q96NI6 719 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 C19orf43Q9BQ61 176 aa13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 ACTR5Q9H9F9 607 aaPredicted RBP13.15□□□□□ -0.3
PRRC2B-207ENST00000458550 UTP20O75691 2785 aaKnown RBP13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 GOLGA6L9A6NEM1 432 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 PDGFAP04085 211 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 HBQ1P09105 142 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 TPH1P17752 444 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 AGXTP21549 392 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 CD97P48960 835 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 RPA4Q13156 261 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 PRKG2Q13237 762 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 IL10RAQ13651 578 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 PRAMEF17Q5VTA0 474 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 CPZQ66K79 652 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 SERPINA9Q86WD7 417 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 AMIGO1Q86WK6 493 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 OR1L3Q8NH93 324 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 TFGQ92734 400 aaPredicted RBP13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 TFB2MQ9H5Q4 396 aaKnown RBP13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 LRRC4CQ9HCJ2 640 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 PCDHGA9Q9Y5G4 932 aaKnown RBP13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
PRRC2B-207ENST00000458550 FER1L5A0AVI2 2057 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 C9J4A7 227 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 E7EQ34 232 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 BTN3A3O00478 584 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 BTN3A1O00481 513 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 PSMD3O43242 534 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 LDB2O43679 373 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 GSTM1P09488 218 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 GP1BBP13224 206 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 ACRV1P26436 265 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 PTGIRP43119 386 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 LMAN1P49257 510 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 CDKN1CP49918 316 aaPredicted RBP13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 ITGA1P56199 1179 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 GSTM4Q03013 218 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 CACNG1Q06432 222 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 MSLNQ13421 630 aaPredicted RBP13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 ZNF517Q6ZMY9 492 aaPredicted RBP13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 SYTL1Q8IYJ3 562 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 GPR135Q8IZ08 494 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 UBL4BQ8N7F7 174 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 OR52E1Q8NGJ3 308 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 CPT1CQ8TCG5 803 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 OR52A5Q9H2C5 316 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 XKR8Q9H6D3 395 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 NLE1Q9NVX2 485 aaPredicted RBP13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 TCFL5Q9UL49 500 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 DUSP10Q9Y6W6 482 aa13.13□□□□□ -0.31
PRRC2B-207ENST00000458550 HIVEP3Q5T1R4 2406 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms