RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 DNTTIP2Q5QJE6 756 aaKnown RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 DUS1LQ6P1R4 473 aaKnown RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 CES3Q6UWW8 571 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 FAM92BQ6ZTR7 304 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 CARFQ8N187 725 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 CRELD1Q96HD1 420 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 TRIT1Q9H3H1 467 aaKnown RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 ZNF768Q9H5H4 540 aaKnown RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 ASF1AQ9Y294 204 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 RPS6KL1Q9Y6S9 549 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 AHCTF1Q8WYP5 2266 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 OGNP20774 298 aaKnown RBP22.57■■□□□ 1.2
CBX3-204ENST00000456948 RPS3P23396 243 aaKnown RBP eCLIP22.57■■□□□ 1.2
CBX3-204ENST00000456948 SEPHS1P49903 392 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 ATP1A2P50993 1020 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 SEMA3AQ14563 771 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 ZNF658BQ4V348 819 aaPredicted RBP22.57■■□□□ 1.2
CBX3-204ENST00000456948 NEPROQ6NW34 567 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 KMT5CQ86Y97 462 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 LMNTD2Q8IXW0 634 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 OR4E2Q8NGC2 313 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 CALML6Q8TD86 181 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 ZNF669Q96BR6 464 aaPredicted RBP22.57■■□□□ 1.2
CBX3-204ENST00000456948 NAT9Q9BTE0 207 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 TFB2MQ9H5Q4 396 aaKnown RBP22.57■■□□□ 1.2
CBX3-204ENST00000456948 MARCH4Q9P2E8 410 aaPredicted RBP22.57■■□□□ 1.2
CBX3-204ENST00000456948 MRFAP1Q9Y605 127 aa22.57■■□□□ 1.2
CBX3-204ENST00000456948 SLC5A10A0PJK1 596 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 OR6C74A6NCV1 312 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 DNALI1O14645 258 aaPredicted RBP22.56■■□□□ 1.2
CBX3-204ENST00000456948 ITGB6P18564 788 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 LEPRP48357 1165 aaKnown RBP22.56■■□□□ 1.2
CBX3-204ENST00000456948 FOXM1Q08050 763 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 HSPA14Q0VDF9 509 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 IL11RAQ14626 422 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 ANKRD20A4Q4UJ75 823 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 RNASEH2BQ5TBB1 312 aaKnown RBP22.56■■□□□ 1.2
CBX3-204ENST00000456948 OTOAQ7RTW8 1153 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 LDB1Q86U70 411 aaPredicted RBP22.56■■□□□ 1.2
CBX3-204ENST00000456948 TBC1D21Q8IYX1 336 aa22.56■■□□□ 1.2
CBX3-204ENST00000456948 CCNL2Q96S94 520 aaPredicted RBP22.56■■□□□ 1.2
CBX3-204ENST00000456948 TLCD2A6NGC4 264 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 USP1O94782 785 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 ESR1P03372 595 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 EIF3BP55884 814 aaKnown RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 ETF1P62495 437 aaKnown RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 CLN3Q13286 438 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 KCTD19Q17RG1 926 aaPredicted RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 MANEAQ5SRI9 462 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 TMTC4Q5T4D3 741 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 IZUMO3Q5VZ72 239 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 ANKS6Q68DC2 871 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 TTC23LQ6PF05 361 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 XKR5Q6UX68 686 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 MICALCLQ6ZW33 695 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 TMEM135Q86UB9 458 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 BPHLQ86WA6 291 aaPredicted RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 BMPERQ8N8U9 685 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 PHC3Q8NDX5 983 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 JPH3Q8WXH2 748 aaPredicted RBP22.55■■□□□ 1.2
CBX3-204ENST00000456948 KLHL6Q8WZ60 621 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 STAMBPL1Q96FJ0 436 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 CCDC68Q9H2F9 335 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 FOXJ2Q9P0K8 574 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 B3GALT1Q9Y5Z6 326 aa22.55■■□□□ 1.2
CBX3-204ENST00000456948 TTC4O95801 387 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 SHMT2P34897 504 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 PTGIRP43119 386 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 MAGEA3P43357 314 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 ADARP55265 1226 aaKnown RBP22.54■■□□□ 1.2
CBX3-204ENST00000456948 CXADRP78310 365 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 MORF4L2Q15014 288 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 LONRF1Q17RB8 773 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 CCDC81Q6ZN84 652 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 GPR155Q7Z3F1 870 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 AMIGO1Q86WK6 493 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 ZFAND4Q86XD8 727 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 SLC22A15Q8IZD6 547 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 PDIK1LQ8N165 341 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 ZSCAN1Q8NBB4 408 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 SIDT2Q8NBJ9 832 aaKnown RBP22.54■■□□□ 1.2
CBX3-204ENST00000456948 FCRL3Q96P31 734 aaPredicted RBP22.54■■□□□ 1.2
CBX3-204ENST00000456948 HGH1Q9BTY7 390 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 PDE7BQ9NP56 450 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 INTS10Q9NVR2 710 aaKnown RBP22.54■■□□□ 1.2
CBX3-204ENST00000456948 ITPR1Q14643 2758 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 ZFYVE26Q68DK2 2539 aa22.54■■□□□ 1.2
CBX3-204ENST00000456948 GSAPA4D1B5 854 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 GOLGA8KD6RF30 607 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 GOLGA8TH3BQL2 631 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 NELFEP18615 380 aaKnown RBP22.53■■□□□ 1.2
CBX3-204ENST00000456948 POLR2CP19387 275 aaPredicted RBP22.53■■□□□ 1.2
CBX3-204ENST00000456948 ARNTP27540 789 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 AOAHP28039 575 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 ACADLP28330 430 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 CCR7P32248 378 aa22.53■■□□□ 1.2
CBX3-204ENST00000456948 ARCN1P48444 511 aaKnown RBP22.53■■□□□ 1.2
CBX3-204ENST00000456948 CSE1LP55060 971 aaKnown RBP22.53■■□□□ 1.2
CBX3-204ENST00000456948 HSD11B2P80365 405 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms