RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 RNF215Q9Y6U7 377 aa17.45■□□□□ 0.38
FAM239A-203ENST00000456563 HMX2A2RU54 273 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 PPM1DO15297 605 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 VIPP01282 170 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 NUDT17P0C025 328 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 MPC1LP0DKB6 136 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CEACAM1P13688 526 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 SAT1P21673 171 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CNTFP26441 200 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 NDUFS1P28331 727 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 NR1D2Q14995 579 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 TRIP6Q15654 476 aaKnown RBP17.44■□□□□ 0.38
FAM239A-203ENST00000456563 ZKSCAN8Q15776 578 aaPredicted RBP17.44■□□□□ 0.38
FAM239A-203ENST00000456563 LRRC8EQ6NSJ5 796 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 GUSBP11Q6P575 273 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 ADGRD1Q6QNK2 874 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 ZNF438Q7Z4V0 828 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CEP97Q8IW35 865 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 TRIM48Q8IWZ4 208 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CNPY4Q8N129 248 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 ZFPM2Q8WW38 1151 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 UCK1Q9HA47 277 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 SLC40A1Q9NP59 571 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 DLL3Q9NYJ7 618 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CFAP20Q9Y6A4 193 aaKnown RBP17.44■□□□□ 0.38
FAM239A-203ENST00000456563 COLEC10Q9Y6Z7 277 aa17.44■□□□□ 0.38
FAM239A-203ENST00000456563 CPED1A4D0V7 1026 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 RHPN2P1A8MT19 583 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 KRT38O76015 456 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 WISP3O95389 354 aaPredicted RBP17.43■□□□□ 0.38
FAM239A-203ENST00000456563 SHBGP04278 402 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 STMN1P16949 149 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
FAM239A-203ENST00000456563 ACADVLP49748 655 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 RGS4P49798 205 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 PGGT1BP53609 377 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 DNAJC3Q13217 504 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 BIRC2Q13490 618 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 MROH9Q5TGP6 573 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 UNC5DQ6UXZ4 953 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 CYHR1Q6ZMK1 362 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 TAOK1Q7L7X3 1001 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 EFL1Q7Z2Z2 1120 aaKnown RBP17.43■□□□□ 0.38
FAM239A-203ENST00000456563 SPNS2Q8IVW8 549 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 HNRNPLLQ8WVV9 542 aaKnown RBP17.43■□□□□ 0.38
FAM239A-203ENST00000456563 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.43■□□□□ 0.38
FAM239A-203ENST00000456563 MVB12BQ9H7P6 319 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 CAB39LQ9H9S4 337 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 SYTL2Q9HCH5 934 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 ASF1AQ9Y294 204 aa17.43■□□□□ 0.38
FAM239A-203ENST00000456563 PRAMEF33A0A0G2JMD5 474 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TCEA3O75764 348 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 MATN4O95460 622 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TSPAN12O95859 305 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 GP1BAP07359 652 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 ZNF37AP17032 561 aaPredicted RBP17.42■□□□□ 0.38
FAM239A-203ENST00000456563 MAPK9P45984 424 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 GPR3P46089 330 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 IL2P60568 153 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 RAB10P61026 200 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 ABRQ12979 859 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 ILKQ13418 452 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 BMPR2Q13873 1038 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 RASA2Q15283 850 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 PERM1Q5SV97 790 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 LGSNQ5TDP6 509 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 DUS1LQ6P1R4 473 aaKnown RBP17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TMEM207Q6UWW9 146 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TMEM26Q6ZUK4 368 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TDRPQ86YL5 185 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 TBC1D21Q8IYX1 336 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 NKAPQ8N5F7 415 aaKnown RBP17.42■□□□□ 0.38
FAM239A-203ENST00000456563 PHC3Q8NDX5 983 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 IFI44Q8TCB0 444 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 EEF1AKMT1Q8WVE0 214 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 CCDC74AQ96AQ1 378 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 PDLIM5Q96HC4 596 aaKnown RBP17.42■□□□□ 0.38
FAM239A-203ENST00000456563 FOPNLQ96NB1 174 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 FERD3LQ96RJ6 166 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 KIR3DX1Q9H7L2 352 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 GPAMQ9HCL2 828 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 PCDHGA1Q9Y5H4 931 aa17.42■□□□□ 0.38
FAM239A-203ENST00000456563 LILRA5A6NI73 299 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 KRT37O76014 449 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 RPN2P04844 631 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 SNRPAP09012 282 aaKnown RBP17.41■□□□□ 0.38
FAM239A-203ENST00000456563 CRABP2P29373 138 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 CSRP3P50461 194 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 NOVA1P51513 510 aaKnown RBP17.41■□□□□ 0.38
FAM239A-203ENST00000456563 KRT33BQ14525 404 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 ZNF460Q14592 562 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 BEND6Q5SZJ8 279 aaPredicted RBP17.41■□□□□ 0.38
FAM239A-203ENST00000456563 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 RASGRP3Q8IV61 690 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 OR5AR1Q8NGP9 310 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 OR5K2Q8NHB8 316 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 SKA2Q8WVK7 121 aaPredicted RBP17.41■□□□□ 0.38
FAM239A-203ENST00000456563 ISL2Q96A47 359 aa17.41■□□□□ 0.38
FAM239A-203ENST00000456563 LINGO1Q96FE5 620 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms