RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 USP24Q9UPU5 2620 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 DMXL2Q8TDJ6 3036 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 SLC5A10A0PJK1 596 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 IQCF5A8MTL0 148 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 STMND1H3BQB6 276 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 POLR2CP19387 275 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 FMO4P31512 558 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 PTGIRP43119 386 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 TMPRSS3P57727 454 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 RNASEH2BQ5TBB1 312 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 NEPROQ6NW34 567 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 PRSS42Q7Z5A4 293 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 C17orf53Q8N3J3 647 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 UBXN4Q92575 508 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 SLCO2A1Q92959 643 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 ZPBPQ9BS86 351 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 HGH1Q9BTY7 390 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 ZNF768Q9H5H4 540 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 POLG2Q9UHN1 485 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 ACSL6Q9UKU0 697 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 VPS9D1Q9Y2B5 631 aa17.6■□□□□ 0.41
PDLIM2-215ENST00000456545 GSAPA4D1B5 854 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 MAP3K7O43318 606 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CCR7P32248 378 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 ARCN1P48444 511 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 ATP1A2P50993 1020 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CLN3Q13286 438 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 TGIF1Q15583 401 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 ZNF658BQ4V348 819 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 DNAJC21Q5F1R6 531 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CCDC81Q6ZN84 652 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 OTOAQ7RTW8 1153 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 TBC1D21Q8IYX1 336 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 SIDT2Q8NBJ9 832 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 OR52E1Q8NGJ3 308 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 GABPB2Q8TAK5 448 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 SKA2Q8WVK7 121 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 STAMBPL1Q96FJ0 436 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 FCRL3Q96P31 734 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CCNL2Q96S94 520 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CD180Q99467 661 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 MAP3K3Q99759 626 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 KCND1Q9NSA2 647 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 C20orf96Q9NUD7 363 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 CRYL1Q9Y2S2 319 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 FREM2Q5SZK8 3169 aa17.59■□□□□ 0.41
PDLIM2-215ENST00000456545 ASPMQ8IZT6 3477 aa17.58■□□□□ 0.41
PDLIM2-215ENST00000456545 H3BMM5 538 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 MATN2O00339 956 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 USP1O94782 785 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 RPN2P04844 631 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CHRM3P20309 590 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CDH3P22223 829 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 RPS3P23396 243 aaKnown RBP eCLIP17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 PPP1CAP62136 330 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 ETF1P62495 437 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 ABRQ12979 859 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 LONRF1Q17RB8 773 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 TTC23LQ6PF05 361 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 SYT10Q6XYQ8 523 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 GPR155Q7Z3F1 870 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 AMIGO1Q86WK6 493 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 RASGRP3Q8IV61 690 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 IL22RA1Q8N6P7 574 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 BMPERQ8N8U9 685 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 OR5AR1Q8NGP9 310 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CALML6Q8TD86 181 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 KLHL6Q8WZ60 621 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CRELD1Q96HD1 420 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 SIGLEC10Q96LC7 697 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 OR6C1Q96RD1 312 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 KRT12Q99456 494 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 TRIM31Q9BZY9 425 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 P2RY12Q9H244 342 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CCDC68Q9H2F9 335 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 TFB2MQ9H5Q4 396 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 CPNE5Q9HCH3 593 aa17.58■□□□□ 0.4
PDLIM2-215ENST00000456545 TLCD2A6NGC4 264 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 BHMG1C9JSJ3 638 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 E5RI56 91 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 SMAPO00193 183 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 TTI1O43156 1089 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 ARNTP27540 789 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 AOAHP28039 575 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 ACADLP28330 430 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 BBS9Q3SYG4 887 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 TMTC4Q5T4D3 741 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 ARHGAP40Q5TG30 622 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 ZNF470Q6ECI4 717 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 TMEM135Q86UB9 458 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 SLC22A15Q8IZD6 547 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 PDIK1LQ8N165 341 aa17.57■□□□□ 0.4
PDLIM2-215ENST00000456545 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms