RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CDK16Q00536 496 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 BOP1Q14137 746 aaKnown RBP17.38■□□□□ 0.37
MSH6-207ENST00000456246 SYTL3Q4VX76 610 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 PCID2Q5JVF3 399 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 OR4E2Q8NGC2 313 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 OR4L1Q8NH43 312 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 ELMO1Q92556 727 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 IL22Q9GZX6 179 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 SYTL2Q9HCH5 934 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 C1GALT1Q9NS00 363 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 FGF21Q9NSA1 209 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 KCND3Q9UK17 655 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 BTRCQ9Y297 605 aa17.38■□□□□ 0.37
MSH6-207ENST00000456246 TLN1Q9Y490 2541 aaKnown RBP17.38■□□□□ 0.37
MSH6-207ENST00000456246 B8ZZF3 427 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 MAP3K7O43318 606 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 ZNF28P17035 718 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 GRIA1P42261 906 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 TUBB4BP68371 445 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 CYP4F2P78329 520 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 BASP1P80723 227 aaKnown RBP17.37■□□□□ 0.37
MSH6-207ENST00000456246 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
MSH6-207ENST00000456246 ARMC3Q5W041 872 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 EXD3Q8N9H8 876 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 GLIS1Q8NBF1 620 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 STARD8Q92502 1023 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 FANCEQ9HB96 536 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 LATS2Q9NRM7 1088 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 SOHLH2Q9NX45 425 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 BFARQ9NZS9 450 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 ANAPC5Q9UJX4 755 aa17.37■□□□□ 0.37
MSH6-207ENST00000456246 GCN1Q92616 2671 aaKnown RBP17.36■□□□□ 0.37
MSH6-207ENST00000456246 GSAPA4D1B5 854 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 OR51F1A6NGY5 319 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 C21orf140B9A014 251 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 EBLN1P0CF75 366 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 ZSCAN5DPP0CG00 497 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 FOLR1P15328 257 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 POLR2CP19387 275 aaPredicted RBP17.36■□□□□ 0.37
MSH6-207ENST00000456246 CDH3P22223 829 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 PDHA2P29803 388 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 SHMT2P34897 504 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 CCR10P46092 362 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 PREPP48147 710 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 NPY2RP49146 381 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 TTPAP49638 278 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 KPNA2P52292 529 aaKnown RBP17.36■□□□□ 0.37
MSH6-207ENST00000456246 CDC20Q12834 499 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 PRUNE1Q86TP1 453 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 AMIGO1Q86WK6 493 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 TBC1D21Q8IYX1 336 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 UNC5BQ8IZJ1 945 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 MPP5Q8N3R9 675 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 GALNT6Q8NCL4 622 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 OR52E1Q8NGJ3 308 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 FAM117AQ9C073 453 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 GEMIN8Q9NWZ8 242 aaKnown RBP17.36■□□□□ 0.37
MSH6-207ENST00000456246 SLC2A6Q9UGQ3 507 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 POLG2Q9UHN1 485 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 TUBD1Q9UJT1 453 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 PADI1Q9ULC6 663 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 ASF1AQ9Y294 204 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 PCDHB3Q9Y5E6 796 aa17.36■□□□□ 0.37
MSH6-207ENST00000456246 SLC5A10A0PJK1 596 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 C2orf74A8MZ97 194 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 RECKO95980 971 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 FAM87AP0C7U9 286 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 MSL3P1P0C860 447 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 TCN2P20062 427 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 TPSB2P20231 275 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 DLSTP36957 453 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 SARNPP82979 210 aaKnown RBP17.35■□□□□ 0.37
MSH6-207ENST00000456246 TPSAB1Q15661 275 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 ZNF534Q76KX8 674 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 SEC14L1Q92503 715 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 ZNF778Q96MU6 729 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 NAP1L3Q99457 506 aaPredicted RBP17.35■□□□□ 0.37
MSH6-207ENST00000456246 HGH1Q9BTY7 390 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 PITPNM3Q9BZ71 974 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 MRM3Q9HC36 420 aaKnown RBP17.35■□□□□ 0.37
MSH6-207ENST00000456246 CATSPERZQ9NTU4 200 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 IL17BQ9UHF5 180 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 CROTQ9UKG9 612 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 JRKLQ9Y4A0 524 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 PCDHGA6Q9Y5G7 932 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 PRSS21Q9Y6M0 314 aa17.35■□□□□ 0.37
MSH6-207ENST00000456246 BTN3A1O00481 513 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 CPNE3O75131 537 aaKnown RBP17.34■□□□□ 0.37
MSH6-207ENST00000456246 PLA2G2AP14555 144 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 ACADLP28330 430 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 ARCN1P48444 511 aaKnown RBP17.34■□□□□ 0.37
MSH6-207ENST00000456246 SESN2P58004 480 aaPredicted RBP17.34■□□□□ 0.37
MSH6-207ENST00000456246 KCNAB1Q14722 419 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 PWWP2BQ6NUJ5 590 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 PHC3Q8NDX5 983 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms