RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 HSD3B2P26439 372 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CD82P27701 267 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TPP2P29144 1249 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 HNRNPH3P31942 346 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CD96P40200 585 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TSPAN7P41732 249 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ECI1P42126 302 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 LEPRP48357 1165 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 RPL26P61254 145 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PPP1CAP62136 330 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CDK18Q07002 472 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 FOXM1Q08050 763 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ADCY2Q08462 1091 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PPIDQ08752 370 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PEX6Q13608 980 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 LRP8Q14114 963 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 IGFBP7Q16270 282 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC18A3Q16572 532 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CLPPQ16740 277 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 INSCQ1MX18 579 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 DEFB109BQ30KR1 87 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TEX44Q53QW1 395 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 KAZNQ674X7 775 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC9A4Q6AI14 798 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 BORAQ6PGQ7 559 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 WDR74Q6RFH5 385 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 MICALCLQ6ZW33 695 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC9B2Q86UD5 537 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 RFX6Q8HWS3 928 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF547Q8IVP9 402 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 NLGN4XQ8N0W4 816 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ARHGEF39Q8N4T4 335 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 NLGN4YQ8NFZ3 816 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CTNNBL1Q8WYA6 563 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 FATE1Q969F0 183 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 GLYATL1Q969I3 302 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SH3KBP1Q96B97 665 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF669Q96BR6 464 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 HDAC11Q96DB2 347 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 IMP4Q96G21 291 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TCTN2Q96GX1 697 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SGSM3Q96HU1 749 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TGM7Q96PF1 710 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 LYSMD1Q96S90 227 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 DDA1Q9BW61 102 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ADGRE3Q9BY15 652 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ASPSCR1Q9BZE9 553 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 B3GNT4Q9C0J1 378 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC25A18Q9H1K4 315 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CARD9Q9H257 536 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 GOLPH3Q9H4A6 298 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 DEF6Q9H4E7 631 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 C10orf88Q9H8K7 445 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 AKIRIN1Q9H9L7 192 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 NHEJ1Q9H9Q4 299 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 GPN2Q9H9Y4 310 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A7Q9HAW7 530 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A10Q9HAW8 530 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A8Q9HAW9 530 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 MAGEE1Q9HCI5 957 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SARS2Q9NP81 518 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 GEMIN8Q9NWZ8 242 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 VPS18Q9P253 973 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PDP2Q9P2J9 529 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UVRAGQ9P2Y5 699 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 AMACRQ9UHK6 382 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PSMD13Q9UNM6 376 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 RPL26L1Q9UNX3 145 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 TFR2Q9UP52 801 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 WDR37Q9Y2I8 494 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SF3B6Q9Y3B4 125 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF711Q9Y462 761 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PCDHGA3Q9Y5H0 932 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.61□□□□□ -1.671e-7■■■□□ 15.2
GTF3C3-208ENST00000455546 PCM1Q15154 2024 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ESPL1Q14674 2120 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CNTRLQ7Z7A1 2325 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 SPTA1P02549 2419 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KIR2DS5A0A0G2JLQ3 304 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 A0A0G2JNG1 304 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PRR19A6NJB7 356 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PDZK1P1A8MUH7 402 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KIR2DS3K7RE56 304 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CHUKO15111 745 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GSC2O15499 205 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 ARHGAP6O43182 974 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 GPR39O43194 453 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CST8O60676 142 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PPFIA2O75334 1257 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KATNA1O75449 491 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 RASSF9O75901 435 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 UBXN7O94888 489 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 KRT1P04264 644 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM253P0C7T8 217 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 BRAFP15056 766 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 PECAM1P16284 738 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 NR1D1P20393 614 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 COMTP21964 271 aa4.6□□□□□ -1.67
GTF3C3-208ENST00000455546 CA4P22748 312 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms