RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MAN1A2O60476 641 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 VPS4BO75351 444 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 DIRAS1O95057 198 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 KCNH1O95259 989 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
SMPD4-213ENST00000454468 GNPDA1P46926 289 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 UGT3A2Q3SY77 523 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 TPGS2Q68CL5 300 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 CERS6Q6ZMG9 384 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 CYHR1Q6ZMK1 362 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 C11orf96Q7Z7L8 435 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 DCAF4L2Q8NA75 395 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 OR2T12Q8NG77 320 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 TMIGD2Q96BF3 282 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 RUBCNLQ9H714 662 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 ADGRE2Q9UHX3 823 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 COQ6Q9Y2Z9 468 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 PRKAB1Q9Y478 270 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 PLK4O00444 970 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 HS6ST1O60243 411 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 B3GALT4O96024 378 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 GRIA2P42262 883 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 HSPA13P48723 471 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 NAE1Q13564 534 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 ZNF284Q2VY69 593 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 XKR6Q5GH73 641 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 GRAMD4Q6IC98 578 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 CRTC3Q6UUV7 619 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 CHST9Q7L1S5 443 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 ADGRG6Q86SQ4 1221 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 TMEM159Q96B96 161 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 ROPN1LQ96C74 230 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 TPD52L3Q96J77 140 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 SLC46A2Q9BY10 475 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 NUDT4Q9NZJ9 180 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 SPASTQ9UBP0 616 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 TBC1D30Q9Y2I9 924 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 MED16Q9Y2X0 877 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 OAS3Q9Y6K5 1087 aaKnown RBP11.75□□□□□ -0.53
SMPD4-213ENST00000454468 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 LZTS3O60299 673 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 HLA-EP13747 358 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SYN1P17600 705 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ETV3P41162 512 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 NFKB2Q00653 900 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CBLBQ13191 982 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SELPLGQ14242 412 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 TYSND1Q2T9J0 566 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 PTCHD3Q3KNS1 767 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 PRMT9Q6P2P2 845 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SPATA19Q7Z5L4 167 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 GALNT5Q7Z7M9 940 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 C12orf76Q8N812 135 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 GPR150Q8NGU9 434 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ITM2BQ9Y287 266 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 PCDHB1Q9Y5F3 818 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 FOXD2O60548 495 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ADH1AP07327 375 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 FESP07332 822 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 LAG3P18627 525 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CR2P20023 1033 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 HLA-FP30511 346 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 HNF4AP41235 474 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 MYLK3Q32MK0 819 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CMTR2Q8IYT2 770 aaKnown RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 RGL4Q8IZJ4 473 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 TTLL2Q9BWV7 592 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SDR39U1Q9NRG7 319 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 IL37Q9NZH6 218 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 E2F3O00716 465 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ZBTB11O95625 1053 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 TYRP14679 529 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 DNAJB1P25685 340 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 MYBPC1Q00872 1141 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CHIT1Q13231 466 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 FAM98BQ52LJ0 330 aaKnown RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CRTC1Q6UUV9 634 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 Q6ZSR9 355 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 ADCK2Q7Z695 626 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 NXPE1Q8N323 547 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 PIH1D2Q8WWB5 315 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 SH3KBP1Q96B97 665 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 BIRC7Q96CA5 298 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 CWH43Q9H720 699 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 AIG1Q9NVV5 245 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
SMPD4-213ENST00000454468 TDRKHQ9Y2W6 561 aaKnown RBP11.74□□□□□ -0.53
SMPD4-213ENST00000454468 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms