RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 OTX2P32243 289 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 PRLHRP49683 370 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 RPA4Q13156 261 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 TFDP2Q14188 446 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 B3GNTL1Q67FW5 361 aaPredicted RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 FCRL6Q6DN72 434 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 ZNF449Q6P9G9 518 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 BLOC1S5Q8TDH9 187 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 PPP4R1Q8TF05 950 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 TFB1MQ8WVM0 346 aaKnown RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 PTERQ96BW5 349 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 ULK4Q96C45 1275 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 FCRL5Q96RD9 977 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 WDR77Q9BQA1 342 aaPredicted RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 ZNF552Q9H707 407 aaPredicted RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 UGT1A7Q9HAW7 530 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 UGT1A10Q9HAW8 530 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 UGT1A8Q9HAW9 530 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 ATP13A2Q9NQ11 1180 aa13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 ANKRD17O75179 2603 aaKnown RBP13.85□□□□□ -0.19
LYSMD3-202ENST00000453259 C2orf81A6NN90 581 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 IFRD1O00458 451 aaPredicted RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 ST6GAL1P15907 406 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 ITGA3P26006 1051 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 AIMP2Q13155 320 aaKnown RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 SLC18A3Q16572 532 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 PRAMEF17Q5VTA0 474 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 DUS1LQ6P1R4 473 aaKnown RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 HOOK3Q86VS8 718 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 DENND1AQ8TEH3 1009 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 N4BP2L2Q92802 583 aaPredicted RBP13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 VPS50Q96JG6 964 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 MRGPRX2Q96LB1 330 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 TRAPPC9Q96Q05 1148 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 RANBP9Q96S59 729 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 FSD1LQ9BXM9 530 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 UBP1Q9NZI7 540 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 NDOR1Q9UHB4 597 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 TRHDEQ9UKU6 1024 aa13.84□□□□□ -0.19
LYSMD3-202ENST00000453259 PCM1Q15154 2024 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 C5orf60A6NFR6 353 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 OR2B3O76000 313 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 LCA5LO95447 670 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 EDN3P14138 238 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 NFKB1P19838 968 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 CD68P34810 354 aaPredicted RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 PBX1P40424 430 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 SLC1A1P43005 524 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 TSFMP43897 325 aaKnown RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 ARCN1P48444 511 aaKnown RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 TPM4P67936 248 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 WASHC5Q12768 1159 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 RAPSNQ13702 412 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 TAF1AQ15573 450 aaPredicted RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 CYP2A13Q16696 494 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 CDHR3Q6ZTQ4 885 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 AMIGO1Q86WK6 493 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 CPNE8Q86YQ8 564 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 RFX6Q8HWS3 928 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 CFAP206Q8IYR0 622 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 PPM1MQ96MI6 270 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 ASB8Q9H765 288 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 SEC16AO15027 2179 aa13.83□□□□□ -0.2
LYSMD3-202ENST00000453259 A0A1B0GUH1 482 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 AGPSO00116 658 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 BTN3A1O00481 513 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 ZSCAN9O15535 394 aaPredicted RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 GPR39O43194 453 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 LDB2O43679 373 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 KRT1P04264 644 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 LMAN1P49257 510 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 MESDQ14696 234 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 ZRSR2Q15696 482 aaKnown RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 FAM69BQ5VUD6 431 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 IRAK1BP1Q5VVH5 260 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 MRPL14Q6P1L8 145 aaKnown RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 FBXO38Q6PIJ6 1188 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 SPESP1Q6UW49 350 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 IGFL2Q6UWQ7 119 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 SPOCD1Q6ZMY3 1216 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 DET1Q7L5Y6 550 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 C19orf47Q8N9M1 422 aaKnown RBP13.82□□□□□ -0.2
LYSMD3-202ENST00000453259 INPP5DQ92835 1189 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms