RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ACOT8O14734 319 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 MRASO14807 208 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 NRP2O60462 931 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 BCAS2O75934 225 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 LINC00032P0C843 101 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 UROSP10746 265 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 LBPP18428 481 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 NTSR1P30989 418 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 PTPN5P54829 565 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 ECT2LQ008S8 904 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 MS4A2Q01362 244 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 FLOT2Q14254 428 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 CRY1Q16526 586 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 XKR7Q5GH72 579 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 OGFOD2Q6N063 350 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 MACC1Q6ZN28 852 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 PAF1Q8N7H5 531 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 GPR26Q8NDV2 337 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 OR56A4Q8NGH8 313 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 NAT14Q8WUY8 206 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SCRN2Q96FV2 425 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 HHIPQ96QV1 700 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 ZNF382Q96SR6 550 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 ECSITQ9BQ95 431 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 CPEB1Q9BZB8 566 aaKnown RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 CEP44Q9C0F1 390 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 TIMM22Q9Y584 194 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 WDR87Q6ZQQ6 2873 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 A8MX80 341 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 LIN7AO14910 233 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 CASQ2O14958 399 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 TDGF1P13385 188 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 HLA-EP13747 358 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 COL9A1P20849 921 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 MRPL19P49406 292 aaKnown RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 CCNHP51946 323 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 DMWDQ09019 674 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 BLMHQ13867 455 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 PCBP2Q15366 365 aaKnown RBP eCLIP10.52□□□□□ -0.738e-7■■■■□ 21.6
PKP4-206ENST00000452162 RBBP7Q16576 425 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 MMEL1Q495T6 779 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 CARD16Q5EG05 197 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 LRRC66Q68CR7 880 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 IZUMO2Q6UXV1 221 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 GPRIN3Q6ZVF9 776 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 EFL1Q7Z2Z2 1120 aaKnown RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 NXPE1Q8N323 547 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 RNF148Q8N7C7 305 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 ZNF366Q8N895 744 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 PDPRQ8NCN5 879 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 ESAMQ96AP7 390 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 TUBGCP3Q96CW5 907 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SDR39U1Q9NRG7 319 aaPredicted RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 SUCOQ9UBS9 1254 aaKnown RBP10.52□□□□□ -0.73
PKP4-206ENST00000452162 CRLS1Q9UJA2 301 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SLC25A13Q9UJS0 675 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SLC8A2Q9UPR5 921 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 ST14Q9Y5Y6 855 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 STON1Q9Y6Q2 735 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 SPAG17Q6Q759 2223 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 PLXNB3Q9ULL4 1909 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 GON4LQ3T8J9 2241 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 BBIP1A8MTZ0 92 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 CRCPO75575 148 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 MATN4O95460 622 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 SP9P0CG40 484 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 HGFP14210 728 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 ITGB6P18564 788 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 LHCGRP22888 699 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 MSX2P35548 267 aaPredicted RBP10.51□□□□□ -0.73
PKP4-206ENST00000452162 SEMG2Q02383 582 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 ENPP2Q13822 863 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 KIF19Q2TAC6 998 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 EOGTQ5NDL2 527 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 GPRC6AQ5T6X5 926 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 KIAA1211LQ6NV74 962 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 DPY19L3Q6ZPD9 716 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 USP45Q70EL2 814 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 TRMT11Q7Z4G4 463 aaKnown RBP10.51□□□□□ -0.73
PKP4-206ENST00000452162 MIER2Q8N344 545 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 CLDN19Q8N6F1 224 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 MRGPRX3Q96LB0 322 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 GABRG3Q99928 467 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 FBXO4Q9UKT5 387 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 PSMD13Q9UNM6 376 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 ABCA7Q8IZY2 2146 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 A0A1W2PQF6 199 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 SLC25A14O95258 325 aaPredicted RBP10.51□□□□□ -0.73
PKP4-206ENST00000452162 POP4O95707 220 aaKnown RBP10.51□□□□□ -0.73
PKP4-206ENST00000452162 HOXB2P14652 356 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 RGS4P49798 205 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 GSTA3Q16772 222 aa10.51□□□□□ -0.73
PKP4-206ENST00000452162 C18orf21Q32NC0 220 aaPredicted RBP10.51□□□□□ -0.73
PKP4-206ENST00000452162 FNDC3BQ53EP0 1204 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms