RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 ZNF449Q6P9G9 518 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 KLHL35Q6PF15 583 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 CEACAM20Q6UY09 585 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
FAM3A-216ENST00000449971 OR13J1Q8NGT2 312 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 OR6P1Q8NGX9 317 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.09■□□□□ 0.33
FAM3A-216ENST00000449971 PBKQ96KB5 322 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 TEFMQ96QE5 360 aaKnown RBP17.09■□□□□ 0.33
FAM3A-216ENST00000449971 FBXO8Q9NRD0 319 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 TCAF1Q9Y4C2 921 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 COLEC10Q9Y6Z7 277 aa17.09■□□□□ 0.33
FAM3A-216ENST00000449971 CACNA1DQ01668 2161 aa17.08■□□□□ 0.33
FAM3A-216ENST00000449971 A1L4Q6 167 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ZSCAN12O43309 604 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 VPS4BO75351 444 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 AP2A2O94973 939 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 GOT2P00505 430 aaKnown RBP17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ANKRD34CP0C6C1 535 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 FOXN2P32314 431 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 FOXM1Q08050 763 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ABHD18Q0P651 414 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ERV3-1Q14264 604 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 TRIP13Q15645 432 aaPredicted RBP17.08■□□□□ 0.32
FAM3A-216ENST00000449971 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.32
FAM3A-216ENST00000449971 AFTPHQ6ULP2 937 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ASB18Q6ZVZ8 466 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 NLRP9Q7RTR0 991 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 REXO1L1PQ8IX06 675 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ZFPM2Q8WW38 1151 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 MS4A14Q96JA4 679 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 RMDN2Q96LZ7 410 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 ZNF778Q96MU6 729 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 TTC1Q99614 292 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 COG4Q9H9E3 785 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 EIF2B3Q9NR50 452 aaKnown RBP17.08■□□□□ 0.32
FAM3A-216ENST00000449971 EPHA6Q9UF33 1036 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 RPS6KL1Q9Y6S9 549 aa17.08■□□□□ 0.32
FAM3A-216ENST00000449971 MKRN2OSH3BPM6 223 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 IFRD1O00458 451 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 POLR1CO15160 346 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 TOX3O15405 576 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 KATNA1O75449 491 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 F8A1P23610 371 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 NSG1P42857 185 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 TERF1P54274 439 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 PRAMEP78395 509 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 ITIH4Q14624 930 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 PCID2Q5JVF3 399 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 FHL5Q5TD97 284 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 LYPLAL1Q5VWZ2 237 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 EFCAB3Q8N7B9 438 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 OR4L1Q8NH43 312 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 MAGOHBQ96A72 148 aaKnown RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 FERD3LQ96RJ6 166 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 AP1M1Q9BXS5 423 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 RAB33BQ9H082 229 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 ZNF768Q9H5H4 540 aaKnown RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 KIR3DX1Q9H7L2 352 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 CHRAC1Q9NRG0 131 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 HRASLS2Q9NWW9 162 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
FAM3A-216ENST00000449971 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 PCDHB3Q9Y5E6 796 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 HEBP2Q9Y5Z4 205 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 KCNMB2Q9Y691 235 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 PRSS21Q9Y6M0 314 aa17.07■□□□□ 0.32
FAM3A-216ENST00000449971 OR6C74A6NCV1 312 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 TTLL8A6PVC2 850 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 GSTM1P09488 218 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 NDUFS1P28331 727 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 PDHA2P29803 388 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 DLSTP36957 453 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 PREPP48147 710 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 CD97P48960 835 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 NPY2RP49146 381 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 VPS41P49754 854 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 PPP1CAP62136 330 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 CRADDP78560 199 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 GSTM4Q03013 218 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 FASTKD1Q53R41 847 aaKnown RBP17.06■□□□□ 0.32
FAM3A-216ENST00000449971 ARMC6Q6NXE6 501 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 PRSS42Q7Z5A4 293 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 TMEM135Q86UB9 458 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 RASGEF1CQ8N431 466 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
FAM3A-216ENST00000449971 ZPBPQ9BS86 351 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 ULBP3Q9BZM4 244 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 SPRY4Q9C004 299 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 TTC7AQ9ULT0 858 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-216ENST00000449971 UNC79Q9P2D8 2635 aa17.06■□□□□ 0.32
FAM3A-216ENST00000449971 AP3B1O00203 1094 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms