RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 HAS2Q92819 552 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 THOC3Q96J01 351 aaKnown RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SPATA32Q96LK8 384 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 CFAP57Q96MR6 1250 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 KREMEN1Q96MU8 473 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 GPR137Q96N19 417 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TIMM29Q9BSF4 260 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 AP1M1Q9BXS5 423 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 GTPBP4Q9BZE4 634 aaKnown RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 CATSPERBQ9H7T0 1116 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 MRM3Q9HC36 420 aaKnown RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 DNPEPQ9ULA0 475 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SONP18583 2426 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 A6NHS1 94 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 J3KR12 359 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 ZNF749O43361 778 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CRLF1O75462 422 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 USP1O94782 785 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 LCA5LO95447 670 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 IFNA2P01563 188 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 BRAFP15056 766 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 ABOP16442 354 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 FDXRP22570 491 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CES1P23141 567 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CHRNB4P30926 498 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 DCDP81605 110 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 FOXD4L6Q3SYB3 417 aaPredicted RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 TDRD12Q587J7 1177 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 XP32Q5T750 250 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 LRRC66Q68CR7 880 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 ALKBH2Q6NS38 261 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 RHBDD2Q6NTF9 364 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 PODNL1Q6PEZ8 512 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 FOXD4L3Q6VB84 417 aaPredicted RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 NCCRP1Q6ZVX7 275 aaPredicted RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 ENOSF1Q7L5Y1 443 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 TSPAN33Q86UF1 283 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 GPR135Q8IZ08 494 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 NDUFAF2Q8N183 169 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CPSF7Q8N684 471 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 ZFPM2Q8WW38 1151 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 PAGE5Q96GU1 130 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 AGAP2Q99490 1192 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 GPATCH1Q9BRR8 931 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 RIOK2Q9BVS4 552 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 MRPL18Q9H0U6 180 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 AKTIPQ9H8T0 292 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 SRA1Q9HD15 236 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 KCNJ16Q9NPI9 418 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 C1GALT1Q9NS00 363 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 RASSF1Q9NS23 344 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 IL17CQ9P0M4 197 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 LRFN1Q9P244 771 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 MRPS2Q9Y399 296 aaKnown RBP7.61□□□□□ -1.19
LINC01961-201ENST00000449954 AP1M2Q9Y6Q5 423 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 SPTBP11277 2137 aa7.61□□□□□ -1.19
LINC01961-201ENST00000449954 GTF3C1Q12789 2109 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ARHGAP42A6NI28 874 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 MATN2O00339 956 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 PRRG2O14669 202 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 KMOO15229 486 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 FGF10O15520 208 aaPredicted RBP7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ALOX12BO75342 701 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 KLHL18O94889 574 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ATE1O95260 518 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 YEATS4O95619 227 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 VCLP18206 1134 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 RPL10P27635 214 aaKnown RBP7.6□□□□□ -1.19
LINC01961-201ENST00000449954 GABRB2P47870 512 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 PREPP48147 710 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 FKBP3Q00688 224 aaKnown RBP7.6□□□□□ -1.19
LINC01961-201ENST00000449954 KEAP1Q14145 624 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 SYCP1Q15431 976 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ARMC6Q6NXE6 501 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 KRTAP1-3Q8IUG1 177 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 LILRB4Q8NHJ6 448 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 NTAN1Q96AB6 310 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 FAM81BQ96LP2 452 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 PSKH2Q96QS6 385 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
LINC01961-201ENST00000449954 RNF32Q9H0A6 362 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 LRRC19Q9H756 370 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ACP6Q9NPH0 428 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 HRASLS2Q9NWW9 162 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 CNOT6Q9ULM6 557 aaKnown RBP7.6□□□□□ -1.19
LINC01961-201ENST00000449954 PPIL1Q9Y3C6 166 aa7.6□□□□□ -1.19
LINC01961-201ENST00000449954 ANKRD12Q6UB98 2062 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 NKX2-6A6NCS4 301 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 FAM90A27PA6NNH2 459 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 ADAM10O14672 748 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CHUKO15111 745 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 ARHGEF9O43307 516 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CNOT3O75175 753 aaKnown RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 TOXO94900 526 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 PGLSO95336 258 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms