RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SBK3P0C264 359 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SLC35G4P0C7Q5 338 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 HNRNPKP61978 463 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 TSNQ15631 228 aaKnown RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 PRRT3Q5FWE3 981 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ADAMTSL2Q86TH1 951 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 FAM111AQ96PZ2 611 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ATOH8Q96SQ7 321 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 MRPL46Q9H2W6 279 aaKnown RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SPASTQ9UBP0 616 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 RAB23Q9ULC3 237 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 TMEM131Q92545 1883 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 TK2O00142 265 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 KERAO60938 352 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 RPL10P27635 214 aaKnown RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 MPLP40238 635 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 RXRGP48443 463 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 GRIK2Q13002 908 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ZNF423Q2M1K9 1284 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 UAP1L1Q3KQV9 507 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 LAIR1Q6GTX8 287 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ABRAXAS1Q6UWZ7 409 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 UNC5DQ6UXZ4 953 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 STAG3L4Q8TBR4 150 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SKA2Q8WVK7 121 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ZDHHC5Q9C0B5 715 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 PRDM8Q9NQV8 689 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 SLC6A14Q9UN76 642 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 PSMD13Q9UNM6 376 aa13.73□□□□□ -0.21
SHMT2-203ENST00000449049 ZFC3H1O60293 1989 aaKnown RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 PATE3B3GLJ2 98 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 PIAS2O75928 621 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 CFIP05156 583 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ENO2P09104 434 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 KCNC1P48547 511 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ABRQ12979 859 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ELOCQ15369 112 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 TCEA2Q15560 299 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 SEPT7Q16181 437 aaKnown RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 TRIM61Q5EBN2 209 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 PRAMEF14Q5SWL7 426 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 SDR16C5Q8N3Y7 309 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ZNF548Q8NEK5 533 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 RDH11Q8TC12 318 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 DLG3Q92796 817 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 FOPNLQ96NB1 174 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 SLC12A9Q9BXP2 914 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 TAAR2Q9P1P5 351 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 PDZK1P1A8MUH7 402 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 SNX2O60749 519 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 EML2O95834 649 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 DHRS4L1P0CG22 281 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 C1orf61Q13536 156 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 CLCA4Q14CN2 919 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 SHBQ15464 509 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 PLA2G2CQ5R387 149 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 IL27RAQ6UWB1 636 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 UBE2R2Q712K3 238 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 TAF8Q7Z7C8 310 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ARFGAP2Q8N6H7 521 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ANKRD42Q8N9B4 389 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 FBXO15Q8NCQ5 510 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ARMC2Q8NEN0 867 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 CNOT10Q9H9A5 744 aaKnown RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 CPSF2Q9P2I0 782 aaKnown RBP13.72□□□□□ -0.21
SHMT2-203ENST00000449049 RNF112Q9ULX5 631 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 OARD1Q9Y530 152 aa13.72□□□□□ -0.21
SHMT2-203ENST00000449049 G3V2L1 256 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 AQP9O43315 295 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 F3P13726 295 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 ARRB1P49407 418 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-203ENST00000449049 WDR4P57081 412 aaKnown RBP13.71□□□□□ -0.21
SHMT2-203ENST00000449049 PHKG1Q16816 387 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 GKN2Q86XP6 184 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 SUMF1Q8NBK3 374 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 MDM1Q8TC05 714 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 TFGQ92734 400 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-203ENST00000449049 INSM2Q96T92 566 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-203ENST00000449049 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 PARVBQ9HBI1 364 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-203ENST00000449049 MID2Q9UJV3 735 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 PDE10AQ9Y233 779 aa13.71□□□□□ -0.21
SHMT2-203ENST00000449049 A0A1B0GTQ1 180 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 SYCE1LA8MT33 242 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms