RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CACUL1Q86Y37 369 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 RASGEF1AQ8N9B8 481 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 HCAR2Q8TDS4 363 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 GLYATL1Q969I3 302 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 VPS33AQ96AX1 596 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 NAF1Q96HR8 494 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC28A3Q9HAS3 691 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 RDH14Q9HBH5 336 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 DYRK4Q9NR20 520 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 RAD18Q9NS91 495 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 FARSBQ9NSD9 589 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 SMOXQ9NWM0 555 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 GDE1Q9NZC3 331 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 KLHL42Q9P2K6 505 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 ENO4A6NNW6 628 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRIM38O00635 465 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 KPNA5O15131 536 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TSPAN6O43657 245 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 MMP20O60882 483 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ULK1O75385 1050 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC22A3O75751 556 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 WDR47O94967 919 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 FTH1P02794 183 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 EPHX1P07099 455 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 C8GP07360 202 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRR35P0CG20 571 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC2A4P14672 509 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 CTSCP53634 463 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM115Q12893 351 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 KCNC3Q14003 757 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 CPSF6Q16630 551 aaKnown RBP eCLIP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 AP5B1Q2VPB7 878 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SYTL3Q4VX76 610 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PLEKHS1Q5SXH7 462 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 OGFOD2Q6N063 350 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM220Q6QAJ8 160 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 GPR149Q86SP6 731 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRIM74Q86UV6 250 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 KBTBD6Q86V97 674 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SPATA24Q86W54 205 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TERB1Q8NA31 727 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ASB11Q8WXH4 323 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SUSD6Q92537 303 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ARRDC3Q96B67 414 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TIFAQ96CG3 184 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 CCT7Q99832 543 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 KXD1Q9BQD3 176 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC12A9Q9BXP2 914 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PLA2G2FQ9BZM2 168 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ATG10Q9H0Y0 220 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ACTR8Q9H981 624 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 AIG1Q9NVV5 245 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ETAA1Q9NY74 926 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 MAP10Q9P2G4 905 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 BCAP29Q9UHQ4 241 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 MSRAQ9UJ68 235 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZNF490Q9ULM2 529 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 GBF1Q92538 1859 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRORSD1PA6NEY8 169 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 CCDC154A6NI56 674 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 EIF4E1BA6NMX2 242 aaKnown RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 BBIP1A8MTZ0 92 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SGTAO43765 313 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 NUAK1O60285 661 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 CYP2A7P20853 494 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ITPKAP23677 461 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 FCARP24071 287 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 WASP42768 502 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PREPP48147 710 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC7A2P52569 658 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 HMGCS1Q01581 520 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 RUNX3Q13761 415 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 BLMHQ13867 455 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 ELAVL3Q14576 367 aaKnown RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 PDGFRLQ15198 375 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 IMPG1Q17R60 797 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 RFTN2Q52LD8 501 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC44A4Q53GD3 710 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 LDLRAP1Q5SW96 308 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 IL23RQ5VWK5 629 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 LPCAT4Q643R3 524 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 RNF111Q6ZNA4 994 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 DHDDSQ86SQ9 333 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 LILRA3Q8N6C8 439 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 DDHD1Q8NEL9 900 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 MCOLN3Q8TDD5 553 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM159Q96B96 161 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRIM8Q9BZR9 551 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
COL6A4P1-201ENST00000446690 UNC80Q8N2C7 3258 aa9.31□□□□□ -0.92
COL6A4P1-201ENST00000446690 K7ESM1 405 aa9.31□□□□□ -0.92
COL6A4P1-201ENST00000446690 LSM1O15116 133 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms