RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 PM20D1Q6GTS8 502 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CYP20A1Q6UW02 462 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 KDELC1Q6UW63 502 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 LYPD8Q6UX82 237 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 Q6ZSR9 355 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 KLHDC8BQ8IXV7 354 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 OR13C4Q8NGS5 318 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 KCTD13Q8WZ19 329 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 MMP27Q9H306 513 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CPA4Q9UI42 421 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
VPS52-212ENST00000445902 MYBPHLA2RUH7 354 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 C19orf81C9J6K1 198 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 ZW10O43264 779 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 KATNA1O75449 491 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 MLYCDO95822 493 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 UROSP10746 265 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CYP2C18P33260 490 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 GRK5P34947 590 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 LILRA4P59901 499 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 MVKQ03426 396 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CYP4F3Q08477 520 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 PWP1Q13610 501 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 NR6A1Q15406 480 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 IL27RAQ6UWB1 636 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 C10orf111Q8N326 155 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 ZNF566Q969W8 418 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 Q96MT0 163 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CYP2S1Q96SQ9 504 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 EHD3Q9NZN3 535 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 FNDC3AQ9Y2H6 1198 aaKnown RBP13.71□□□□□ -0.21
VPS52-212ENST00000445902 A0A096LPI6 279 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 OR2A25A4D2G3 310 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CENPBD1B2RD01 187 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 BTN3A1O00481 513 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 HAT1O14929 419 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 DSCR3O14972 297 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CYP7B1O75881 506 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 RHOBTB1O94844 696 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.21
VPS52-212ENST00000445902 SLC27A1Q6PCB7 646 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 TTC23LQ6PF05 361 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 GALNT10Q86SR1 603 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 DPP10Q8N608 796 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 NETO1Q8TDF5 533 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 NEDD4LQ96PU5 975 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 BEX2Q9BXY8 128 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 SPATC1LQ9H0A9 340 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 MFSD1Q9H3U5 465 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 NEU3Q9UQ49 428 aa13.71□□□□□ -0.21
VPS52-212ENST00000445902 COL1A2P08123 1366 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 ELOVL7A1L3X0 281 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 CD3EAPO15446 510 aaKnown RBP13.71□□□□□ -0.22
VPS52-212ENST00000445902 SLC7A4O43246 635 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 GLP2RO95838 553 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 PIK3CGP48736 1102 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 SLC26A2P50443 739 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 C18orf21Q32NC0 220 aaPredicted RBP13.71□□□□□ -0.22
VPS52-212ENST00000445902 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 BCL7AQ4VC05 210 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 CARD16Q5EG05 197 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 SLX4IPQ5VYV7 408 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 MILR1Q7Z6M3 343 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 SETD9Q8NE22 299 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 STAG3L4Q8TBR4 150 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 OSMRQ99650 979 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 CDADC1Q9BWV3 514 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 NUAK2Q9H093 628 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 GIMAP4Q9NUV9 329 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 PCDHGB6Q9Y5F9 930 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.22
VPS52-212ENST00000445902 CENPXA8MT69 81 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
VPS52-212ENST00000445902 KERAO60938 352 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 APOA1P02647 267 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
VPS52-212ENST00000445902 DAPP51397 102 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 CYP4F2P78329 520 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 GALK2Q01415 458 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 SLC10A7Q0GE19 358 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 TP53BP2Q13625 1128 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 FAM174BQ3ZCQ3 159 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 RFTN2Q52LD8 501 aaPredicted RBP13.7□□□□□ -0.22
VPS52-212ENST00000445902 SIRPB2Q5JXA9 342 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 PNCKQ6P2M8 343 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 NEK5Q6P3R8 708 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 GPRIN3Q6ZVF9 776 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
VPS52-212ENST00000445902 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
VPS52-212ENST00000445902 PCED1BQ96HM7 432 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms