RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SNRPAP09012 282 aaKnown RBP16.85■□□□□ 0.29
LIME1-202ENST00000444951 IDSP22304 550 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 RXRGP48443 463 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 ACADVLP49748 655 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 CLCN7P51798 805 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 TIAL1Q01085 375 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIME1-202ENST00000444951 POU4F1Q01851 419 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 CEP85LQ5SZL2 805 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 LGSNQ5TDP6 509 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 UGT3A1Q6NUS8 523 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 GKN2Q86XP6 184 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 CPNE9Q8IYJ1 553 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 IQCKQ8N0W5 287 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 FSTL5Q8N475 847 aaPredicted RBP16.85■□□□□ 0.29
LIME1-202ENST00000444951 FAM46DQ8NEK8 389 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 CD200R1Q8TD46 325 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 INPP5DQ92835 1189 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 TMEM159Q96B96 161 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 TSPAN17Q96FV3 270 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 WWP1Q9H0M0 922 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 CENPHQ9H3R5 247 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 PRDM8Q9NQV8 689 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 TAAR2Q9P1P5 351 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 GULP1Q9UBP9 304 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 DKK4Q9UBT3 224 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 FETUBQ9UGM5 382 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 NFS1Q9Y697 457 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 IQANK1A0A1B0GTG1 560 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 C17orf113A0A1B0GUU1 675 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 B4DGG1 531 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 LIN7AO14910 233 aaPredicted RBP16.84■□□□□ 0.29
LIME1-202ENST00000444951 KPNA5O15131 536 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 YY2O15391 372 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 STMN1P16949 149 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 PDHA2P29803 388 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 GMPRP36959 345 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 CLCNKAP51800 687 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 ZNF844Q08AG5 666 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 ACSBG2Q5FVE4 666 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 PAQR3Q6TCH7 311 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 HDXQ7Z353 690 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 PDZD3Q86UT5 571 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 VRK3Q8IV63 474 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 CYP4X1Q8N118 509 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 ASZ1Q8WWH4 475 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 CRELD1Q96HD1 420 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 RUFY1Q96T51 708 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 DPEP2Q9H4A9 486 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 GPAMQ9HCL2 828 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 SIRPGQ9P1W8 387 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 TBC1D29Q9UFV1 150 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 DHRS7Q9Y394 339 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 PIKFYVEQ9Y2I7 2098 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 ASXL3Q9C0F0 2248 aa16.84■□□□□ 0.29
LIME1-202ENST00000444951 SLC5A10A0PJK1 596 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 TPP1O14773 563 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 KCNJ13O60928 360 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 CDH16O75309 829 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 TCEA3O75764 348 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 EML2O95834 649 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 GSTM1P09488 218 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 SLC35G4P0C7Q5 338 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 KRT15P19012 456 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 CNTFP26441 200 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 TYK2P29597 1187 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 SKIV2L2P42285 1042 aaKnown RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 SERPINB8P50452 374 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 RAB10P61026 200 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 GSTM4Q03013 218 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 DMPKQ09013 629 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 ILF2Q12905 390 aaKnown RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 ABRQ12979 859 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 TTLL9Q3SXZ7 439 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 ZNF658BQ4V348 819 aaPredicted RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 METRNLQ641Q3 311 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 SFTPA2Q8IWL1 248 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 CFAP61Q8NHU2 1237 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 UNKQ9C0B0 810 aaKnown RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 VPS11Q9H270 941 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 PPCSQ9HAB8 311 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
LIME1-202ENST00000444951 SNX15Q9NRS6 342 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 WDR37Q9Y2I8 494 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 PCDHGA1Q9Y5H4 931 aa16.83■□□□□ 0.28
LIME1-202ENST00000444951 KLHL33A6NCF5 533 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 NEMP2A6NFY4 417 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 YKT6O15498 198 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 RFPL3O75679 317 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 ALDOAP04075 364 aaKnown RBP16.82■□□□□ 0.28
LIME1-202ENST00000444951 PLEKHS1Q5SXH7 462 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 LRIG3Q6UXM1 1119 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 TDRPQ86YL5 185 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
LIME1-202ENST00000444951 ZDHHC1Q8WTX9 485 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms