RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SPCS2Q15005 226 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TSTQ16762 297 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MAP1SQ66K74 1059 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 IL27RAQ6UWB1 636 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 YIPF7Q8N8F6 280 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF557Q8N988 423 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TXNDC5Q8NBS9 432 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC44A5Q8NCS7 719 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 FBXO27Q8NI29 283 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CEP76Q8TAP6 659 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GANCQ8TET4 914 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ITCHQ96J02 903 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF641Q96N77 438 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MCMBPQ9BTE3 642 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NT5C1AQ9BXI3 368 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 FN3KQ9H479 309 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 OXSMQ9NWU1 459 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TNPO3Q9Y5L0 923 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 A0A087WZ62 844 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 NCF1BA6NI72 391 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TTLL8A6PVC2 850 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 NCF1CA8MVU1 366 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TLL1O43897 1013 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SEC22BO75396 215 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SOX30O94993 753 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ERBB2P04626 1255 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SPARCP09486 303 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 NCF1P14598 390 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PPIBP23284 216 aaKnown RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 HOXA10P31260 410 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 RFC2P35250 354 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK-21P61565 698 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SELENBP1Q13228 472 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SLC36A3Q495N2 470 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CRTC2Q53ET0 693 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 LRRC66Q68CR7 880 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 IL31Q6EBC2 164 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 USP30Q70CQ3 517 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 KDELC2Q7Z4H8 507 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ZDHHC21Q8IVQ6 265 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 RAVER1Q8IY67 606 aaKnown RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 GPR65Q8IYL9 337 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 RBFAQ8N0V3 343 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 STAG3L4Q8TBR4 150 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ZFAND1Q8TCF1 268 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TTC9Q92623 222 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 LRRC58Q96CX6 371 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 FAM129BQ96TA1 746 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 OMDQ99983 421 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 WACQ9BTA9 647 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 POLR2J2Q9GZM3 115 aaKnown RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ALG9Q9H6U8 611 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ZFYVE1Q9HBF4 777 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 FAM86C1Q9NVL1 165 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PADI2Q9Y2J8 665 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TCAF1Q9Y4C2 921 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PCDHB3Q9Y5E6 796 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CLCA3PQ9Y6N3 262 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PTPRJQ12913 1337 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CXCR6O00574 342 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ADAM12O43184 909 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SNNO75324 88 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 GLP2RO95838 553 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 IFNA17P01571 189 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 MT-ND2P03891 347 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CHRM3P20309 590 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 HOXD10P28358 340 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CDKN2BP42772 138 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 GSK3BP49841 420 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 MC2RQ01718 297 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PPP3CAQ08209 521 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 KRT33BQ14525 404 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 DUSP7Q16829 419 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 IQCCQ4KMZ1 466 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TOR2AQ5JU69 321 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 BTBD8Q5XKL5 378 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CRTC1Q6UUV9 634 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 FAM35AQ86V20 835 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 LYSMD2Q8IV50 215 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 DNAJB8Q8NHS0 232 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 NELL1Q92832 810 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 FAM167AQ96KS9 214 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ACOX2Q99424 681 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ASPNQ9BXN1 380 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK-6Q9BXR3 956 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 TDRD3Q9H7E2 651 aaKnown RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 CATSPERBQ9H7T0 1116 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 NIT2Q9NQR4 276 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK-18Q9QC07 812 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 SPASTQ9UBP0 616 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 DNMT3LQ9UJW3 386 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 MYH8P13535 1937 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 COL16A1Q07092 1604 aaPredicted RBP5.07□□□□□ -1.6
SCN11A-202ENST00000444237 M0R036 132 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PPEF2O14830 753 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 DNTTP04053 509 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 DHRS4L1P0CG22 281 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 JUPP14923 745 aa5.07□□□□□ -1.6
SCN11A-202ENST00000444237 PCSK2P16519 638 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms