RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CLHC1Q8NHS4 586 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 COQ7Q99807 217 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 TMEM138Q9NPI0 162 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 MCUBQ9NWR8 336 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 IKZF2Q9UKS7 526 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 PCDHGA2Q9Y5H1 932 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CASP6P55212 293 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CDH13P55290 713 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CYP4F3Q08477 520 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CLEC20AQ6ZU45 233 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ARMCX6Q7L4S7 300 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 SMPDL3BQ92485 455 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 COMMD4Q9H0A8 199 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ARL5AQ9Y689 179 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 TCF4P15884 667 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 TCEA1P23193 301 aaKnown RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 PPP3R1P63098 170 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CLCQ05315 142 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 FRRS1Q6ZNA5 592 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 DHDDSQ86SQ9 333 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ZNF461Q8TAF7 563 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 TSEN15Q8WW01 171 aaKnown RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 NXNL1Q96CM4 212 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 OTUB2Q96DC9 234 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 KLHDC7BQ96G42 594 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 LRRC4CQ9HCJ2 640 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 A8MU76 341 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ACP5P13686 325 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 IL12RB1P42701 662 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 JAM2P57087 298 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 LCP2Q13094 533 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 GRM2Q14416 872 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 NIPA2Q8N8Q9 360 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 OR2T12Q8NG77 320 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 MAFFQ9ULX9 164 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 SNX10Q9Y5X0 201 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 VEGFDO43915 354 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 DGCR6Q14129 220 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 GPR151Q8TDV0 419 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ZNF483Q8TF39 744 aaPredicted RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 NTAN1Q96AB6 310 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 RBM4Q9BWF3 364 aaKnown RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 CCNB1IP1Q9NPC3 277 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 TRIP12Q14669 1992 aaPredicted RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 A0A1W2PQ72 361 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ELOVL7A1L3X0 281 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 MPZL2O60487 215 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 KCNE1P15382 129 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 CCINQ13939 588 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 LRRC73Q5JTD7 316 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 GLB1L3Q8NCI6 653 aaPredicted RBP11.05□□□□□ -0.64
FN1-211ENST00000443816 PNPLA2Q96AD5 504 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 KCND1Q9NSA2 647 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 NID2Q14112 1375 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
FN1-211ENST00000443816 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 CBX6O95503 412 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NUDT17P0C025 328 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 RBBP4Q09028 425 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 DPYSL2Q16555 572 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 SOWAHAQ2M3V2 549 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
FN1-211ENST00000443816 MBOAT1Q6ZNC8 495 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 CMC1Q7Z7K0 106 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 AMIGO1Q86WK6 493 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 TMEM156Q8N614 296 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 OR2AJ1Q8NGZ0 328 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NCSTNQ92542 709 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PTPN18Q99952 460 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 MECRQ9BV79 373 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 HHATLQ9HCP6 504 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 TSC22D4Q9Y3Q8 395 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 LRP6O75581 1613 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NDUFS4O43181 175 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 RENP00797 406 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NMBRP28336 390 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 MNDAP41218 407 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 SPIN4Q56A73 249 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 LDB1Q86U70 411 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 SLC35G5Q96KT7 338 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 GDAP2Q9NXN4 497 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ASNA1O43681 348 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ZNF8P17098 575 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 KBTBD8Q8NFY9 601 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PNPT1Q8TCS8 783 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 FCRL4Q96PJ5 515 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 BPGMP07738 259 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PLA2G16P53816 162 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 CCNIQ14094 377 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms