RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CASC4Q6P4E1 433 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 LRRC8BQ6P9F7 803 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 CCDC137Q6PK04 289 aaKnown RBP20.49■□□□□ 0.87
CDKN3-204ENST00000442975 OR52E1Q8NGJ3 308 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 KIAA1143Q96AT1 154 aaPredicted RBP20.49■□□□□ 0.87
CDKN3-204ENST00000442975 TSSK1BQ9BXA7 367 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 XKR8Q9H6D3 395 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 MVB12BQ9H7P6 319 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 SOHLH2Q9NX45 425 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 LNPEPQ9UIQ6 1025 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 SNX12Q9UMY4 172 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 ASF1AQ9Y294 204 aa20.49■□□□□ 0.87
CDKN3-204ENST00000442975 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.48■□□□□ 0.87
CDKN3-204ENST00000442975 ZNF185O15231 689 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 CD3EAPO15446 510 aaKnown RBP20.48■□□□□ 0.87
CDKN3-204ENST00000442975 PHF2O75151 1096 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 TMEM63AO94886 807 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 EBLN1P0CF75 366 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 TTPAP49638 278 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 KPNA2P52292 529 aaKnown RBP20.48■□□□□ 0.87
CDKN3-204ENST00000442975 CYP4F2P78329 520 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 SARNPP82979 210 aaKnown RBP20.48■□□□□ 0.87
CDKN3-204ENST00000442975 IL11RAQ14626 422 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 CYB5D1Q6P9G0 228 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 FBXO38Q6PIJ6 1188 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 UNC5BQ8IZJ1 945 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 OR5AR1Q8NGP9 310 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 LKAAEAR1Q8TD35 194 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 SLC41A2Q96JW4 573 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 PPM1MQ96MI6 270 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 NRTNQ99748 197 aa20.48■□□□□ 0.87
CDKN3-204ENST00000442975 GPN2Q9H9Y4 310 aaPredicted RBP20.48■□□□□ 0.87
CDKN3-204ENST00000442975 USP27XA6NNY8 438 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 IQCF5A8MTL0 148 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 GOLGA8MH3BSY2 632 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 AVILO75366 819 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 KIAA0754O94854 1291 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 ZNF28P17035 718 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 MAP4P27816 1152 aaKnown RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 CYP1B1Q16678 543 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 PTRHD1Q6GMV3 140 aaKnown RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 PCSK4Q6UW60 755 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 TIPARPQ7Z3E1 657 aaKnown RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 PPP1R3BQ86XI6 285 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 TTC9Q92623 222 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 MFSD3Q96ES6 412 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 STAMBPL1Q96FJ0 436 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 SGSM3Q96HU1 749 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 TRIT1Q9H3H1 467 aaKnown RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 PDE7BQ9NP56 450 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 SAMD15Q9P1V8 674 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 POMT2Q9UKY4 750 aa20.47■□□□□ 0.87
CDKN3-204ENST00000442975 TDRKHQ9Y2W6 561 aaKnown RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 TMEM184BQ9Y519 407 aaPredicted RBP20.47■□□□□ 0.87
CDKN3-204ENST00000442975 GOLGA8KD6RF30 607 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 GOLGA8TH3BQL2 631 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 BTN3A1O00481 513 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 PRMT5O14744 637 aaPredicted RBP20.46■□□□□ 0.87
CDKN3-204ENST00000442975 NDUFS3O75489 264 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 VAPBO95292 243 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 DLGAP3O95886 979 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 FOLR1P15328 257 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 CDH3P22223 829 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 MAGEA6P43360 314 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 HSD11B2P80365 405 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 HSPA14Q0VDF9 509 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 TMED2Q15363 201 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 AMIGO1Q86WK6 493 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 KMT5CQ86Y97 462 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 KRT222Q8N1A0 295 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 MPP5Q8N3R9 675 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 ESX1Q8N693 406 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 GALNT6Q8NCL4 622 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 GRK7Q8WTQ7 553 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 CPT1BQ92523 772 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 KIFC1Q9BW19 673 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 MRM3Q9HC36 420 aaKnown RBP20.46■□□□□ 0.87
CDKN3-204ENST00000442975 SEMA5BQ9P283 1151 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 RARRES3Q9UL19 164 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 SOX13Q9UN79 622 aa20.46■□□□□ 0.87
CDKN3-204ENST00000442975 SDK2Q58EX2 2172 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 SLC5A10A0PJK1 596 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 MATN2O00339 956 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 BTN3A3O00478 584 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 ZBTB11O95625 1053 aaPredicted RBP20.45■□□□□ 0.86
CDKN3-204ENST00000442975 FGF5P12034 268 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 CCR7P32248 378 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 FNTAP49354 379 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 EIF3BP55884 814 aaKnown RBP20.45■□□□□ 0.86
CDKN3-204ENST00000442975 PLOD1Q02809 727 aaPredicted RBP20.45■□□□□ 0.86
CDKN3-204ENST00000442975 ACY1Q03154 408 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 PPP1R7Q15435 360 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 TRIM56Q9BRZ2 755 aaKnown RBP20.45■□□□□ 0.86
CDKN3-204ENST00000442975 SPRY4Q9C004 299 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 TFB2MQ9H5Q4 396 aaKnown RBP20.45■□□□□ 0.86
CDKN3-204ENST00000442975 FGF21Q9NSA1 209 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 GNPTGQ9UJJ9 305 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 PLAGL1Q9UM63 463 aa20.45■□□□□ 0.86
CDKN3-204ENST00000442975 ICKQ9UPZ9 632 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms