RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ATCAYQ86WG3 371 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 FAM71DQ8N9W8 422 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 ACRBPQ8NEB7 543 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 STYXQ8WUJ0 223 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 ALG3Q92685 438 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 ZNF501Q96CX3 271 aaPredicted RBP11.45□□□□□ -0.58
TTC28-203ENST00000442232 TTC1Q99614 292 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 HGH1Q9BTY7 390 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 ACSS2Q9NR19 701 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 NLE1Q9NVX2 485 aaPredicted RBP11.45□□□□□ -0.58
TTC28-203ENST00000442232 SMARCAL1Q9NZC9 954 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 SNX7Q9UNH6 387 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 FARSAQ9Y285 508 aaKnown RBP11.45□□□□□ -0.58
TTC28-203ENST00000442232 DUSP10Q9Y6W6 482 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 IGLV3-16A0A075B6K0 115 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 TRBV5-4A0A0C4DH59 114 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 H7C0S8 307 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 LDB2O43679 373 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 SGTAO43765 313 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 HBQ1P09105 142 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 FURINP09958 794 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 NR1D1P20393 614 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 PGDP52209 483 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 RPS18P62269 152 aaKnown RBP11.44□□□□□ -0.58
TTC28-203ENST00000442232 SEMA5AQ13591 1074 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 SEL1L2Q5TEA6 688 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 DENND5AQ6IQ26 1287 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 TMEM135Q86UB9 458 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 AMIGO1Q86WK6 493 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 APLFQ8IW19 511 aaPredicted RBP11.44□□□□□ -0.58
TTC28-203ENST00000442232 LILRA3Q8N6C8 439 aaPredicted RBP11.44□□□□□ -0.58
TTC28-203ENST00000442232 LRRC57Q8N9N7 239 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 DNAAF3Q8N9W5 541 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 LRFN5Q96NI6 719 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
TTC28-203ENST00000442232 LACRTQ9GZZ8 138 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 OR52A5Q9H2C5 316 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 ACTR5Q9H9F9 607 aaPredicted RBP11.44□□□□□ -0.58
TTC28-203ENST00000442232 SERTAD3Q9UJW9 196 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 TLK1Q9UKI8 766 aa11.44□□□□□ -0.58
TTC28-203ENST00000442232 ARGFXA6NJG6 315 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 C9J4A7 227 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 E7EVH7 732 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 BTN3A1O00481 513 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 LIN7AO14910 233 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 AP2A1O95782 977 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 FTCDO95954 541 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 OR56A5P0C7T3 313 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TPH1P17752 444 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 PRDX3P30048 256 aaKnown RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 SHMT2P34897 504 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 PPARGP37231 505 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 NSG1P42857 185 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 ITGA1P56199 1179 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 PLOD1Q02809 727 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 GPS2Q13227 327 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 ITIH4Q14624 930 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 DBN1Q16643 649 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 LYPLAL1Q5VWZ2 237 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 IZUMO3Q5VZ72 239 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 RAD9BQ6WBX8 426 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 PPP1R21Q6ZMI0 780 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 KLHDC8BQ8IXV7 354 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 GPR135Q8IZ08 494 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 OR52E1Q8NGJ3 308 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 ELMO1Q92556 727 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TFGQ92734 400 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 C17orf62Q9BQA9 187 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TMEM121Q9BTD3 319 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 SLC25A23Q9BV35 468 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TSSK1BQ9BXA7 367 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 CHST8Q9H2A9 424 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 TFB2MQ9H5Q4 396 aaKnown RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 POLG2Q9UHN1 485 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 PACSIN2Q9UNF0 486 aaPredicted RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 ASF1AQ9Y294 204 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 PADI2Q9Y2J8 665 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
TTC28-203ENST00000442232 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
TTC28-203ENST00000442232 SPTBP11277 2137 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 DOPEY2Q9Y3R5 2298 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 TNRC6AQ8NDV7 1962 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 CCDC78A2IDD5 438 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 ERI2A8K979 691 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 E7EQ34 232 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 MEN1O00255 615 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 DDX3YO15523 660 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 DNAJB5O75953 348 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 METTL18O95568 372 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 RAB40ALP0C0E4 278 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 MSL3P1P0C860 447 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 ST6GAL1P15907 406 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms