RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 Q8N3U1 123 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 RNF10Q8N5U6 811 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 LCN9Q8WX39 176 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 INSM2Q96T92 566 aaPredicted RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 TSGA10Q9BZW7 698 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 TFB2MQ9H5Q4 396 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 FGF21Q9NSA1 209 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 SOHLH2Q9NX45 425 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 TMPRSS11EQ9UL52 423 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 PSMD13Q9UNM6 376 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 FARSAQ9Y285 508 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 MAN2B2Q9Y2E5 1009 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 WDR37Q9Y2I8 494 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 ARL5AQ9Y689 179 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 CDC14CA4D256 554 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 C2orf74A8MZ97 194 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 C9J4A7 227 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 H7C0S8 307 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PFDN6O15212 129 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 POLBP06746 335 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 OR56A5P0C7T3 313 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 MSL3P1P0C860 447 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 WT1P19544 449 aaPredicted RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 PSMB4P28070 264 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PTPN4P29074 926 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 FDFT1P37268 417 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 NSG1P42857 185 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PRLHRP49683 370 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ZNF75DP51815 510 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 CTSCP53634 463 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 RRADP55042 308 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 CACNG1Q06432 222 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ERV3-1Q14264 604 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 LLGL1Q15334 1064 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 KHDC1Q4VXA5 237 aaKnown RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 ZRANB3Q5FWF4 1079 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 CAPRIN2Q6IMN6 1127 aaKnown RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 TTC23LQ6PF05 361 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 DET1Q7L5Y6 550 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 GPR135Q8IZ08 494 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 MAIP1Q8WWC4 291 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 KRT35Q92764 455 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 MR1Q95460 341 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PMEPA1Q969W9 287 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 VPS50Q96JG6 964 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ELMO2Q96JJ3 720 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 MAP3K3Q99759 626 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 BAG1Q99933 345 aaPredicted RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 NLE1Q9NVX2 485 aaPredicted RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 SLC24A2Q9UI40 661 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ANAPC5Q9UJX4 755 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 BTRCQ9Y297 605 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PADI2Q9Y2J8 665 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 AP1M2Q9Y6Q5 423 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 IGHV5-51A0A0C4DH38 117 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 MSTNO14793 375 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 BUD23O43709 281 aaKnown RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 SCRG1O75711 98 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PIM1P11309 404 aaPredicted RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 MC4RP32245 332 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 SHMT2P34897 504 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PREPP48147 710 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 PMS2P54278 862 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 SH3BP2P78314 561 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 UGT8Q16880 541 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 SEL1L2Q5TEA6 688 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 UNC5BQ8IZJ1 945 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 RAB42Q8N4Z0 105 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 DNAAF3Q8N9W5 541 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 OR4E2Q8NGC2 313 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 GSDMBQ8TAX9 411 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 CCDC110Q8TBZ0 833 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 SLC22A18Q96BI1 424 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 CLIP3Q96DZ5 547 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ABHD17AQ96GS6 310 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 DHRS4Q9BTZ2 278 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ACSS2Q9NR19 701 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 GPN3Q9UHW5 284 aaPredicted RBP7.57□□□□□ -1.2
CD44-211ENST00000442151 RIMKLBQ9ULI2 386 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 ZNF451Q9Y4E5 1061 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 KCNMB2Q9Y691 235 aa7.57□□□□□ -1.2
CD44-211ENST00000442151 SDK2Q58EX2 2172 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 HEATR9A2RTY3 570 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 GSAPA4D1B5 854 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 E7EVH7 732 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 KPNA5O15131 536 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 NRDCO43847 1150 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 FOLR1P15328 257 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 CYP2A7P20853 494 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 ACRV1P26436 265 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 OAS2P29728 719 aaKnown RBP7.56□□□□□ -1.2
CD44-211ENST00000442151 TMPRSS15P98073 1019 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 XIAPP98170 497 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 TLE1Q04724 770 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 CDH17Q12864 832 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 SYTL3Q4VX76 610 aa7.56□□□□□ -1.2
CD44-211ENST00000442151 AARS2Q5JTZ9 985 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms