RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 FAM151BQ6UXP7 276 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARHGAP36Q6ZRI8 547 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 HEATR4Q86WZ0 1026 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR10G6Q8NH81 332 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 STYXQ8WUJ0 223 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLCO4A1Q96BD0 722 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TSGA13Q96PP4 275 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 NAT9Q9BTE0 207 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 RIOK2Q9BVS4 552 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CPEB1Q9BZB8 566 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC52A3Q9NQ40 469 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 PIH1D1Q9NWS0 290 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 K7ESF4 209 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM16O95361 564 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 HADHAP40939 763 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SUOXP51687 545 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 PLK1P53350 603 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 COPAP53621 1224 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 MYBPC1Q00872 1141 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ITGA9Q13797 1035 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CEACAM7Q14002 265 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 BOP1Q14137 746 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 HERC3Q15034 1050 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ANKRD20A4Q4UJ75 823 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 LGSNQ5TDP6 509 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 IRAK1BP1Q5VVH5 260 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CNTD1Q8N815 330 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 JADE3Q92613 823 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 MCUR1Q96AQ8 359 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ISG20Q96AZ6 181 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 HDAC11Q96DB2 347 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 MYEOVQ96EZ4 313 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 LENG8Q96PV6 779 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 GATA5Q9BWX5 397 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 APPL1Q9UKG1 709 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC39A10Q9ULF5 831 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM98Q9Y2Y6 226 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARIH1Q9Y4X5 557 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARNTLO00327 626 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 DLGAP1O14490 977 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 EPN2O95208 641 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHRNGP07510 517 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC35G4P0C7Q5 338 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF26P17031 533 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHRM3P20309 590 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TIAL1Q01085 375 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZYG11AQ6WRX3 759 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZC3HC1Q86WB0 502 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 IL22RA1Q8N6P7 574 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR13H1Q8NG92 308 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPATA22Q8NHS9 363 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SCAMP4Q969E2 229 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM159Q96B96 161 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TADA1Q96BN2 335 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CLPBQ9H078 707 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 GBA3Q9H227 469 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TDRKHQ9Y2W6 561 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 RPS6KL1Q9Y6S9 549 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 OTOGLQ3ZCN5 2332 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 LNP1A1A4G5 178 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 AP3B1O00203 1094 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CLDN7O95471 211 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PEX11BO96011 259 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MT-CYBP00156 380 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ITGB6P18564 788 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 LPOP22079 712 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 GK3PQ14409 553 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRRC66Q68CR7 880 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 DNAJC14Q6Y2X3 702 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 EFL1Q7Z2Z2 1120 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM74Q86UV6 250 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARHGAP24Q8N264 748 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 FSTL5Q8N475 847 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 BEND7Q8N7W2 519 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR52K1Q8NGK4 314 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 NAT6Q93015 286 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SH3GL3Q99963 347 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC25A51Q9H1U9 297 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR2AG1Q9H205 316 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF696Q9H7X3 374 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 TREX1Q9NSU2 369 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CD300AQ9UGN4 299 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZDHHC2Q9UIJ5 367 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CNOT11Q9UKZ1 510 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 G3BP2Q9UN86 482 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 KCNK6Q9Y257 313 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SOCS5O75159 536 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PDE5AO76074 875 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 UBTFL6P0CB48 400 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 HLA-DPA1P20036 260 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ETV3P41162 512 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CCR5P51681 352 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PGGT1BP53609 377 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PPP2CBP62714 309 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PPP2CAP67775 309 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CDKL1Q00532 357 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms