RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
SMC2-204ENST00000440179 AGPSO00116 658 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 HCRTR1O43613 425 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A9O60656 530 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A6P19224 532 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A1P22309 533 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A4P22310 534 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 PRDX3P30048 256 aaKnown RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 TLR1Q15399 786 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 AGAP7PQ5VUJ5 663 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 PRAMEF13Q5VWM6 474 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 FCRL6Q6DN72 434 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 FAM180AQ6UWF9 173 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 ZNF808Q8N4W9 903 aaPredicted RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 BEND7Q8N7W2 519 aaPredicted RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 DDHD1Q8NEL9 900 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 ENOX1Q8TC92 643 aaKnown RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 TADA1Q96BN2 335 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 IMP4Q96G21 291 aaKnown RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 AGAP4Q96P64 663 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 MYO1AQ9UBC5 1043 aa13.14□□□□□ -0.31
SMC2-204ENST00000440179 GPN3Q9UHW5 284 aaPredicted RBP13.14□□□□□ -0.31
SMC2-204ENST00000440179 CCDC66A2RUB6 948 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 GSAPA4D1B5 854 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 MATN2O00339 956 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 BTN3A3O00478 584 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 BTN3A1O00481 513 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■■■ 26.9
SMC2-204ENST00000440179 CTSBP07858 339 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 TPM2P07951 284 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 GZMAP12544 262 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 UBE2HP62256 183 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 DCDP81605 110 aaKnown RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 ZNF571Q7Z3V5 609 aaPredicted RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 CATSPER1Q8NEC5 780 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 NAT14Q8WUY8 206 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 BTBD6Q96KE9 485 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 TAAR6Q96RI8 345 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 CEP41Q9BYV8 373 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 ZCCHC2Q9C0B9 1178 aaKnown RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 SPRTNQ9H040 489 aaPredicted RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 MRPL47Q9HD33 250 aaKnown RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 SLC22A11Q9NSA0 550 aa13.13□□□□□ -0.31
SMC2-204ENST00000440179 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 DHCR7Q9UBM7 475 aaKnown RBP13.13□□□□□ -0.31
SMC2-204ENST00000440179 NCOA6Q14686 2063 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 GAPDHSO14556 408 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 HOXB4P17483 251 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 NDUFS1P28331 727 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 SSTR2P30874 369 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 HMGCLP35914 325 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 GABRA4P48169 554 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 UBXN1Q04323 297 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 PCSK7Q16549 785 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 CT47A1Q5JQC4 288 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 LDLRAP1Q5SW96 308 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 GPRC6AQ5T6X5 926 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 E4F1Q66K89 784 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 GPR135Q8IZ08 494 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 LILRA3Q8N6C8 439 aaPredicted RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 ACVR1CQ8NER5 493 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 DTX3LQ8TDB6 740 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 NR4A3Q92570 626 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 SRMSQ9H3Y6 488 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 FANCLQ9NW38 375 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 NDOR1Q9UHB4 597 aa13.12□□□□□ -0.31
SMC2-204ENST00000440179 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
SMC2-204ENST00000440179 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms