RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 DGLUCYQ7Z3D6 616 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 CENPVQ7Z7K6 275 aaPredicted RBP3.33□□□□□ -1.88
VPS41-207ENST00000439468 EXOC3L1Q86VI1 746 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 CTAGE4Q8IX94 777 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 PI4KAP1Q8N8J0 262 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 XXYLT1Q8NBI6 393 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 TSPAN14Q8NG11 270 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 LNX1Q8TBB1 728 aaPredicted RBP3.33□□□□□ -1.88
VPS41-207ENST00000439468 PPP4R1Q8TF05 950 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 SPDL1Q96EA4 605 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 MS4A10Q96PG2 267 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 NODALQ96S42 347 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 GAGE2DQ9UEU5 116 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 TUBE1Q9UJT0 475 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 POU2F3Q9UKI9 436 aa3.33□□□□□ -1.88
VPS41-207ENST00000439468 SPIN1Q9Y657 262 aaPredicted RBP3.33□□□□□ -1.88
VPS41-207ENST00000439468 A0A0G2JNG1 304 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ASPDHA6ND91 283 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 TMEM221A6NGB7 291 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 OR10H2O60403 315 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 GPR137BO60478 399 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 KRT36O76013 467 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 LINGO3P0C6S8 592 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 SMIM18P0DKX4 95 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 CKMT2P17540 419 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 AMD1P17707 334 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 MPZP25189 248 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 PTPN3P26045 913 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 EEF1DP29692 281 aaKnown RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 USP8P40818 1118 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ZNF41P51814 821 aaPredicted RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 RPL24P83731 157 aaKnown RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 PPARDQ03181 441 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 MBTD1Q05BQ5 628 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 KIR2DS5Q14953 304 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 VWC2Q2TAL6 325 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 TCP11X2Q5H9J9 407 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ZNF704Q6ZNC4 412 aaPredicted RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 ZBTB49Q6ZSB9 765 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 KCTD8Q6ZWB6 473 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 TUBA1AQ71U36 451 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 DNAJB7Q7Z6W7 309 aaPredicted RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 TMPRSS11BQ86T26 416 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 VSIG1Q86XK7 387 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 CIARTQ8N365 385 aaPredicted RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 RFLNBQ8N5W9 214 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ANKRD13CQ8N6S4 541 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 OLIG1Q8TAK6 271 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 SIPA1Q96FS4 1042 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ZNF558Q96NG5 402 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 TUBA1CQ9BQE3 449 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 NEURL2Q9BR09 285 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 NOL11Q9H8H0 719 aaKnown RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 EBF2Q9HAK2 575 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 Q9N2K0 584 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 MYNNQ9NPC7 610 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 KLHL1Q9NR64 748 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 DDX25Q9UHL0 483 aaKnown RBP3.32□□□□□ -1.88
VPS41-207ENST00000439468 SLC24A2Q9UI40 661 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 OSGIN1Q9UJX0 560 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 ERCC6Q03468 1493 aa3.32□□□□□ -1.88
VPS41-207ENST00000439468 NACADO15069 1562 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ELOVL7A1L3X0 281 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 SOCS5O75159 536 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 MED24O75448 989 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 GAS8-AS1O95177 125 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 PENKP01210 267 aaPredicted RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 UMODP07911 640 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ACHEP22303 614 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 THOP1P52888 689 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 RBPJQ06330 500 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ACSM1Q08AH1 577 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 DMPKQ09013 629 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 COG2Q14746 738 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 TNIP1Q15025 636 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ZRSR1Q15695 479 aaKnown RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 PHLDA2Q53GA4 152 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 FAM133BQ5BKY9 247 aaKnown RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 GRTP1Q5TC63 336 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 STPG1Q5TH74 334 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 KLC3Q6P597 504 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ZNF852Q6ZMS4 543 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 TMPRSS11FQ6ZWK6 438 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ANO5Q75V66 913 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ZNF771Q7L3S4 317 aaPredicted RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 CHST3Q7LGC8 479 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 SLFN11Q7Z7L1 901 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 FOXP4Q8IVH2 680 aaPredicted RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 ARHGAP24Q8N264 748 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 CAMKVQ8NCB2 501 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 EXD1Q8NHP7 514 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 CD101Q93033 1021 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ZNF653Q96CK0 615 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 PKP4Q99569 1192 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 TRAF4Q9BUZ4 470 aaPredicted RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 MOV10L1Q9BXT6 1211 aaKnown RBP3.31□□□□□ -1.88
VPS41-207ENST00000439468 ANKZF1Q9H8Y5 726 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 ACKR4Q9NPB9 350 aa3.31□□□□□ -1.88
VPS41-207ENST00000439468 CHCHD3Q9NX63 227 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms