RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 CNDP1Q96KN2 507 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 SMIM14Q96QK8 99 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 LYSMD1Q96S90 227 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 DHX35Q9H5Z1 703 aaKnown RBP10.83□□□□□ -0.68
CSTF3-203ENST00000438862 EPS8L2Q9H6S3 715 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 ADAM22Q9P0K1 906 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 GPN3Q9UHW5 284 aaPredicted RBP10.83□□□□□ -0.68
CSTF3-203ENST00000438862 NENFQ9UMX5 172 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 PTRH2Q9Y3E5 179 aaKnown RBP10.83□□□□□ -0.68
CSTF3-203ENST00000438862 CCDC88CQ9P219 2028 aa10.83□□□□□ -0.68
CSTF3-203ENST00000438862 PCM1Q15154 2024 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 DOCK10Q96BY6 2186 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 A0A087X0T9 212 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 AGPSO00116 658 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 FANCGO15287 622 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CLDN14O95500 239 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CALB1P05937 261 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 FAM228BP0C875 321 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 MYBL1P10243 752 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CES1P23141 567 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 IL4RP24394 825 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 KIR3DL1P43629 444 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 NSFP46459 744 aaKnown RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CDH6P55285 790 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 RPL26P61254 145 aaKnown RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CCZ1BP86790 482 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CCZ1P86791 482 aaPredicted RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 SPA17Q15506 151 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF789Q5FWF6 425 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF569Q5MCW4 686 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 PRAMEF13Q5VWM6 474 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 PDPK2PQ6A1A2 396 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 B4GALNT4Q76KP1 1039 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 OOSP2Q86WS3 158 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 TGIF2LYQ8IUE0 185 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CHDHQ8NE62 594 aaPredicted RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 OR2Y1Q8NGV0 311 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 OR1L3Q8NH93 324 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 SLC20A1Q8WUM9 679 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ZFPM2Q8WW38 1151 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 NR4A3Q92570 626 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 CALR3Q96L12 384 aaKnown RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 PCDHB18PQ96TA0 734 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 TRIM56Q9BRZ2 755 aaKnown RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ZSCAN5AQ9BUG6 496 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 TLR10Q9BXR5 811 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 GPATCH2LQ9NWQ4 482 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
CSTF3-203ENST00000438862 RPL26L1Q9UNX3 145 aaKnown RBP10.82□□□□□ -0.68
CSTF3-203ENST00000438862 C1orf232A0A0U1RR37 186 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 TMEM200CA6NKL6 621 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 TMEM150CB9EJG8 249 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 E7EQ34 232 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 C19orf84I3L1E1 186 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 MAFKO60675 156 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 CDK14O94921 469 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 CA4P22748 312 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 PREPP48147 710 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 CASP6P55212 293 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 RBPJQ06330 500 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 INAQ16352 499 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 CCDC122Q5T0U0 273 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF648Q5T619 568 aaPredicted RBP10.81□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF662Q6ZS27 426 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 PPP1R32Q7Z5V6 425 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF547Q8IVP9 402 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 GLYATL1Q969I3 302 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 LMF1Q96S06 567 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 SPATA16Q9BXB7 569 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 ENKD1Q9H0I2 346 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 C1GALT1Q9NS00 363 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 WDR37Q9Y2I8 494 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 ANKRD12Q6UB98 2062 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 NUP210LQ5VU65 1888 aa10.81□□□□□ -0.68
CSTF3-203ENST00000438862 CCDC78A2IDD5 438 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 SOWAHDA6NJG2 315 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 MASP2O00187 686 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF749O43361 778 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 FTLP02792 175 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 H2AFZP0C0S5 128 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 ESRRAP11474 423 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 CDH3P22223 829 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 KPNA2P52292 529 aaKnown RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 RPL7AP62424 266 aaKnown RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 PPP2R2AP63151 447 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 ITKQ08881 620 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 Q0VFX4 171 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 TCEAL1Q15170 157 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 RPE65Q16518 533 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 CA9Q16790 459 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 PPP6R3Q5H9R7 873 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 RAD9BQ6WBX8 426 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 H2AFVQ71UI9 128 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 MCOLN2Q8IZK6 566 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 TRAM1L1Q8N609 369 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 OR1N1Q8NGS0 311 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 GPR150Q8NGU9 434 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms