RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 POLR2CP19387 275 aaPredicted RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 CASP1P29466 404 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 HALP42357 657 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 ST13P50502 369 aaKnown RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 ENPEPQ07075 957 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 GALNT3Q14435 633 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 CBWD6Q4V339 395 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 CBWD3Q5JTY5 395 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 CBWD5Q5RIA9 395 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 C6orf52Q5T4I8 152 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 GPRC6AQ5T6X5 926 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 LRRC66Q68CR7 880 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 SHC4Q6S5L8 630 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 WASH2PQ6VEQ5 465 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 COX15Q7KZN9 410 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 OVCH1Q7RTY7 1134 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 FAM131BQ86XD5 332 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 SLC13A5Q86YT5 568 aaPredicted RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 TMEM178AQ8NBL3 297 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 LINC01560Q8TB33 94 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 ZBED6CLQ96FA7 236 aaPredicted RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 CPXM1Q96SM3 734 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 CRB3Q9BUF7 120 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 OR2AG1Q9H205 316 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 ZFYVE1Q9HBF4 777 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 ANKRD10Q9NXR5 420 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 EIF3CLB5ME19 914 aaKnown RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 PDXKO00764 312 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 MAP3K7O43318 606 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 PDIA4P13667 645 aaKnown RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 ZNF7P17097 686 aaPredicted RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 CTPS1P17812 591 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 IL4RP24394 825 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 NR2F2P24468 414 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 ADH7P40394 386 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 RAB28P51157 221 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 VEZF1Q14119 521 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 OR1C1Q15619 314 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 WIPI1Q5MNZ9 446 aaPredicted RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 CNNM4Q6P4Q7 775 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 C11orf57Q6ZUT1 292 aaPredicted RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 BEST3Q8N1M1 668 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 AMER2Q8N7J2 671 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 KAT5Q92993 513 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 RNASE6Q93091 150 aaKnown RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 EIF3CQ99613 913 aaKnown RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 TTYH2Q9BSA4 534 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.6□□□□□ -0.712e-7■■■□□ 17.5
RTN4-211ENST00000438462 FAM207AQ9NSI2 230 aaPredicted RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.6□□□□□ -0.71
RTN4-211ENST00000438462 LPAR3Q9UBY5 353 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
RTN4-211ENST00000438462 NXT1Q9UKK6 140 aaKnown RBP10.6□□□□□ -0.71
RTN4-211ENST00000438462 J3KR12 359 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 TFECO14948 347 aaPredicted RBP10.59□□□□□ -0.71
RTN4-211ENST00000438462 HCRTR1O43613 425 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 LRIG2O94898 1065 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 ALBP02768 609 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 GLI4P10075 376 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 CD46P15529 392 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 CREB1P16220 341 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 SCNN1BP51168 640 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
RTN4-211ENST00000438462 TUBA3CQ13748 450 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 TXNRD3NBQ6F5E7 133 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 SPINK14Q6IE38 97 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 TUBA3EQ6PEY2 450 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 RIPOR1Q6ZS17 1223 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 NDUFAF7Q7L592 441 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 SLC26A9Q7LBE3 791 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 LIX1Q8N485 282 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 RELL2Q8NC24 303 aaPredicted RBP10.59□□□□□ -0.71
RTN4-211ENST00000438462 NT5C3BQ969T7 300 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 TBC1D31Q96DN5 1066 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
RTN4-211ENST00000438462 TIMM29Q9BSF4 260 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 CINPQ9BW66 212 aaPredicted RBP10.59□□□□□ -0.71
RTN4-211ENST00000438462 REG4Q9BYZ8 158 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 SLC26A1Q9H2B4 701 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 BLZF1Q9H2G9 400 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 UBTD1Q9HAC8 227 aa10.59□□□□□ -0.71
RTN4-211ENST00000438462 SRD5A1P18405 259 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 ALAS2P22557 587 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 ASCL1P50553 236 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 AMPD3Q01432 767 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 PRKAA1Q13131 559 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 RPE65Q16518 533 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 LRRTM4Q86VH4 590 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.58□□□□□ -0.72
RTN4-211ENST00000438462 SCRN2Q96FV2 425 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 SMIM14Q96QK8 99 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms