RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SPRTNQ9H040 489 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DHX35Q9H5Z1 703 aaKnown RBP11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SLC22A11Q9NSA0 550 aa11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 TRAV17A0A0B4J275 112 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 H3BMH7 237 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 HCRTR1O43613 425 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MAFKO60675 156 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CDK14O94921 469 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 RASAL1O95294 804 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CYP1A1P04798 512 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 HBQ1P09105 142 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MMP11P24347 488 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DCDP81605 110 aaKnown RBP11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 INAQ16352 499 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ZNF569Q5MCW4 686 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 C3P1Q6ZMU1 363 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CDHR3Q6ZTQ4 885 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 FAM20CQ8IXL6 584 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CARFQ8N187 725 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 WFDC11Q8NEX6 87 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CA5BP1Q8WTZ4 195 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CPLX3Q8WVH0 158 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SMARCE1Q969G3 411 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 GLYATL1Q969I3 302 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SELENOOQ9BVL4 669 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 NT5MQ9NPB1 228 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 C1GALT1Q9NS00 363 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PKD2L2Q9NZM6 624 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 POMT2Q9UKY4 750 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 TMPRSS11EQ9UL52 423 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ZNF232Q9UNY5 417 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PLEKHA6Q9Y2H5 1048 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ZNF835Q9Y2P0 537 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 INTS1Q8N201 2190 aaKnown RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 GPR89AB7ZAQ6 455 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 VEGFDO43915 354 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CRYABP02511 175 aaKnown RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MSL3P1P0C860 447 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 GPR89BP0CG08 455 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 UNGP13051 313 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 UGT1A4P22310 534 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PCSK6P29122 969 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ADSLP30566 484 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 HTR7P34969 479 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MMP13P45452 471 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 NKAIN1Q4KMZ8 207 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 RALGPS1Q5JS13 557 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SHISA6Q6ZSJ9 500 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 RAVER1Q8IY67 606 aaKnown RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 LPCAT1Q8NF37 534 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 OR4E2Q8NGC2 313 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 C18orf12Q96KH6 178 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 INSM2Q96T92 566 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 VPS16Q9H269 839 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ZFAND3Q9H8U3 227 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SYTL2Q9HCH5 934 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SLC24A2Q9UI40 661 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MAN1B1Q9UKM7 699 aa11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 LUC7L2Q9Y383 392 aaKnown RBP11.85□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ADAM10O14672 748 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PROM1O43490 865 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PRAMEF2O60811 474 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 SMC2O95347 1197 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 INHBBP09529 407 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MTHFD1P11586 935 aaKnown RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CHRNB2P17787 502 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 AIF1P55008 147 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 FMO1Q01740 532 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 OGDHQ02218 1023 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DSC2Q02487 901 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ITKQ08881 620 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ANKRD20A8PQ5CZ79 823 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MARC1Q5VT66 337 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 RHBDD2Q6NTF9 364 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 Q6ZPB1 254 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 TRAPPC5Q8IUR0 188 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DMRTC2Q8IXT2 367 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 LYSMD1Q96S90 227 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PEBP4Q96S96 227 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 NUP85Q9BW27 656 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 TDRD1Q9BXT4 1180 aaKnown RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 FAM60AQ9NP50 221 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 ETNK2Q9NVF9 386 aa11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
SMAD9-IT1-201ENST00000437983 PTGFRNQ9P2B2 879 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms