RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 PAQR3Q6TCH7 311 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 XKR5Q6UX68 686 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 UNC5DQ6UXZ4 953 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 RAPH1Q70E73 1250 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 C17orf82Q86X59 251 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 VRK3Q8IV63 474 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 CPNE9Q8IYJ1 553 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 MYO1HQ8N1T3 1032 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 NKAPQ8N5F7 415 aaKnown RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 GIMAP7Q8NHV1 300 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 DCAKDQ8WVC6 231 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 ZFPM2Q8WW38 1151 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 PATE1Q8WXA2 126 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 CAMK1GQ96NX5 476 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 INSM2Q96T92 566 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 SLC30A3Q99726 388 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 TRIT1Q9H3H1 467 aaKnown RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 MVB12BQ9H7P6 319 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 GPAMQ9HCL2 828 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 SCHIP1Q9P0W5 487 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 ZNF624Q9P2J8 865 aaPredicted RBP14.38□□□□□ -0.11
SKA2-202ENST00000437036 LRIT1Q9P2V4 623 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 ASF1AQ9Y294 204 aa14.38□□□□□ -0.11
SKA2-202ENST00000437036 CPED1A4D0V7 1026 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 TCEA3O75764 348 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 SHBGP04278 402 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 ACADLP28330 430 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 UBE2IP63279 158 aaKnown RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 TIAL1Q01085 375 aaKnown RBP eCLIP14.37□□□□□ -0.11
SKA2-202ENST00000437036 DNAJC3Q13217 504 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 BMPR2Q13873 1038 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 TRIP6Q15654 476 aaKnown RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 RSPO4Q2I0M5 234 aaPredicted RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 TAF1BQ53T94 588 aaPredicted RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 TDRPQ86YL5 185 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 ACVR1CQ8NER5 493 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 CFAP61Q8NHU2 1237 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 MAGEC3Q8TD91 643 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 LINGO1Q96FE5 620 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 SLC38A3Q99624 504 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 RTKNQ9BST9 563 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 ROPN1BQ9BZX4 212 aaPredicted RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 CAB39LQ9H9S4 337 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 ROPN1Q9HAT0 212 aaPredicted RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 POLG2Q9UHN1 485 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 TSR3Q9UJK0 312 aaKnown RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
SKA2-202ENST00000437036 CFAP20Q9Y6A4 193 aaKnown RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 ASCC3Q8N3C0 2202 aaKnown RBP14.37□□□□□ -0.11
SKA2-202ENST00000437036 PABPN1LA6NDY0 278 aaKnown RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 RASGRF2O14827 1237 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 CDH16O75309 829 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 CATP04040 527 aaKnown RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 PNLIPP16233 465 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 ZNF37AP17032 561 aaPredicted RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 TYK2P29597 1187 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 CCNFP41002 786 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 GPR3P46089 330 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 RASA2Q15283 850 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 BEND6Q5SZJ8 279 aaPredicted RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 EFL1Q7Z2Z2 1120 aaKnown RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 CEP97Q8IW35 865 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 SFTPA2Q8IWL1 248 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 TBC1D21Q8IYX1 336 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 PHC3Q8NDX5 983 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 BAHD1Q8TBE0 780 aaPredicted RBP14.36□□□□□ -0.11
SKA2-202ENST00000437036 EEF1AKMT1Q8WVE0 214 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 UCK1Q9HA47 277 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 PLAAQ9Y263 795 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 RNF215Q9Y6U7 377 aa14.36□□□□□ -0.11
SKA2-202ENST00000437036 ZFC3H1O60293 1989 aaKnown RBP14.35□□□□□ -0.11
SKA2-202ENST00000437036 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 A0A087X1B8 175 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 LY6G6EA0A0G2JKS1 128 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 TLDC2A0PJX2 215 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 SMIM23A6NLE4 172 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 TRIM49D1C9J1S8 452 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 PHGDHO43175 533 aaKnown RBP14.35□□□□□ -0.11
SKA2-202ENST00000437036 ZBTB14O43829 449 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 GP1BAP07359 652 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 C8GP07360 202 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 MYF5P13349 255 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 CEACAM1P13688 526 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 ACP1P24666 158 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 MAP4P27816 1152 aaKnown RBP14.35□□□□□ -0.11
SKA2-202ENST00000437036 GCAP28676 217 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 PPM1FP49593 454 aaPredicted RBP14.35□□□□□ -0.11
SKA2-202ENST00000437036 ILKQ13418 452 aa14.35□□□□□ -0.11
SKA2-202ENST00000437036 ZNF460Q14592 562 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms