RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CRISP1P54107 249 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ARPC4P59998 168 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 KCNJ2P63252 427 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TMEM63BQ5T3F8 832 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 NPNTQ6UXI9 565 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 MRIQ9BWK5 157 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ERVK-18Q9QC07 812 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 ADAM18Q9Y3Q7 739 aa11.04□□□□□ -0.64
SCN4A-201ENST00000435607 TRIM64CA6NLI5 447 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TSPAN8P19075 237 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CCR10P46092 362 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 POLR2JP52435 117 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TMEM119Q4V9L6 283 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TIGD5Q53EQ6 642 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ARL9Q6T311 187 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 OSBPL2Q9H1P3 480 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MED28Q9H204 178 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PNPLA3Q9NST1 481 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PADI3Q9ULW8 664 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 C5orf51A6NDU8 294 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ITGA10O75578 1167 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 COL6A2P12110 1019 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 BRCC3P46736 316 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MPP2Q14168 576 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF792Q3KQV3 632 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MAF1Q9H063 256 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 SYPP08247 313 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CYP3A5P20815 502 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 S100A2P29034 98 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 NFKB2Q00653 900 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 GNA12Q03113 381 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CNDP2Q96KP4 475 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 INSIG1O15503 277 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CCNOP22674 350 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 AQP1P29972 269 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MTHFRP42898 656 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 LSM3P62310 102 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 RNASE12Q5GAN4 147 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 KIAA0319Q5VV43 1072 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TPGS2Q68CL5 300 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PYDC1Q8WXC3 89 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PLEKHG4BQ96PX9 1271 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 RNF19AQ9NV58 838 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 PDP1Q9P0J1 537 aaPredicted RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF282Q9UDV7 671 aaPredicted RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ATPIF1Q9UII2 106 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 C14orf166Q9Y224 244 aaKnown RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TBX1O43435 398 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CTBP2P56545 445 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 RHBDF2Q6PJF5 856 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 LAPTM4BQ86VI4 370 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 NPLQ9BXD5 320 aaPredicted RBP11.03□□□□□ -0.64
SCN4A-201ENST00000435607 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ABCD2Q9UBJ2 740 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 IGFBP5P24593 272 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 DECR1Q16698 335 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF613Q6PF04 617 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ASB18Q6ZVZ8 466 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 TM9SF4Q92544 642 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 MIPEPQ99797 713 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 OR51V1Q9H2C8 321 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 DNAJC18Q9H819 358 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 EDARQ9UNE0 448 aa11.03□□□□□ -0.64
SCN4A-201ENST00000435607 ATP6V1G2O95670 118 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 LPLP06858 475 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 HEXBP07686 556 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 GLP1RP43220 463 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 ABCG1P45844 678 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 AKR1D1P51857 326 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 GRIK5Q16478 980 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 NOXRED1Q6NXP6 359 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 BEND4Q6ZU67 534 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 PTPN18Q99952 460 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 KCNIP3Q9Y2W7 256 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 ELOVL7A1L3X0 281 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 PRPS2P11908 318 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 SEMA5AQ13591 1074 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 GTF2H2Q13888 395 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 GTF2H2CQ6P1K8 395 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 CPSF7Q8N684 471 aaKnown RBP11.02□□□□□ -0.64
SCN4A-201ENST00000435607 CENPMQ9NSP4 180 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 ZFP37Q9Y6Q3 630 aaPredicted RBP11.02□□□□□ -0.64
SCN4A-201ENST00000435607 MAU2Q9Y6X3 613 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF521Q96K83 1311 aa11.02□□□□□ -0.64
SCN4A-201ENST00000435607 E7EQ34 232 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 LAMTOR5O43504 91 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF776Q68DI1 518 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms