RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 BMPR2Q13873 1038 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 ACSBG2Q5FVE4 666 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 PIM3Q86V86 326 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 CPNE9Q8IYJ1 553 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 TBC1D21Q8IYX1 336 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 ARL14Q8N4G2 192 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 CFAP61Q8NHU2 1237 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 LINGO1Q96FE5 620 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 RMDN2Q96LZ7 410 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 INSM2Q96T92 566 aaPredicted RBP16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 SLC38A3Q99624 504 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 OLFM1Q99784 485 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 BTBD3Q9Y2F9 522 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 WDR37Q9Y2I8 494 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 ACOT9Q9Y305 439 aa16.15■□□□□ 0.18
CTDSPL-204ENST00000435525 ZFHX2Q9C0A1 2572 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 GOLGA6L10A6NI86 522 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 OR52A4PA6NMU1 304 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SLC30A4O14863 429 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 ZBTB14O43829 449 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 MT-ND3P03897 115 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SHBGP04278 402 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 C8GP07360 202 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 UQCRHP07919 91 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 GIMD1P0DJR0 217 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CDK4P11802 303 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 BRAFP15056 766 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PNLIPP16233 465 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 ZNF37AP17032 561 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CYP2A7P20853 494 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CSRP1P21291 193 aaKnown RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PI4KAP42356 2102 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 GPR3P46089 330 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SLCO1A2P46721 670 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 KPNA2P52292 529 aaKnown RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 MAZP56270 477 aaKnown RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 ATP6V0D1P61421 351 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SP140Q13342 867 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 GBX1Q14549 363 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CLCA4Q14CN2 919 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PLCL1Q15111 1095 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PROX2Q3B8N5 592 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 BEND6Q5SZJ8 279 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 KLC3Q6P597 504 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 KLHL35Q6PF15 583 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 LRIG3Q6UXM1 1119 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 C17orf82Q86X59 251 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 DCUN1D3Q8IWE4 304 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PHC3Q8NDX5 983 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 ANKRD7Q92527 254 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PDLIM5Q96HC4 596 aaKnown RBP16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 TMEM109Q9BVC6 243 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 EPB41L1Q9H4G0 881 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CAAP1Q9H8G2 361 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CAB39LQ9H9S4 337 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 UCK1Q9HA47 277 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SNX15Q9NRS6 342 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 LRIT1Q9P2V4 623 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 GALPQ9UBC7 116 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 TBK1Q9UHD2 729 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 CDYLQ9Y232 598 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
CTDSPL-204ENST00000435525 SLC16A5O15375 505 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 PHGDHO43175 533 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ACADLP28330 430 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 SLC19A1P41440 591 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 UBE2IP63279 158 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ILKQ13418 452 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ZKSCAN8Q15776 578 aaPredicted RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 FAM83EQ2M2I3 478 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 KRT71Q3SY84 523 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 PIP4P1Q86T03 277 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ALYREFQ86V81 257 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ACVR1CQ8NER5 493 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 OR5K2Q8NHB8 316 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 GIMAP7Q8NHV1 300 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 WDR48Q8TAF3 677 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 MCOLN3Q8TDD5 553 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 EEF1AKMT1Q8WVE0 214 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 PATE1Q8WXA2 126 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 AHCYL2Q96HN2 611 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 SLC30A3Q99726 388 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 RTKNQ9BST9 563 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 RAB11FIP5Q9BXF6 653 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 NMRAL1Q9HBL8 299 aa16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 SCHIP1Q9P0W5 487 aaPredicted RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 ZNF624Q9P2J8 865 aaPredicted RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 TSR3Q9UJK0 312 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 CFAP20Q9Y6A4 193 aaKnown RBP16.13■□□□□ 0.17
CTDSPL-204ENST00000435525 PLXNB3Q9ULL4 1909 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms