RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC27A6Q9Y2P4 619 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 MRPS17Q9Y2R5 130 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 DRGXA6NNA5 263 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 BCL10O95999 233 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CKBP12277 381 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PRKAR2AP13861 404 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TACR2P21452 398 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 HLCSP50747 726 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 LIMK1P53667 647 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC5A3P53794 718 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 BDH1Q02338 343 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 C1QTNF12Q5T7M4 302 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PGM2L1Q6PCE3 622 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CELF5Q8N6W0 485 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 OR2AP1Q8NGE2 309 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PLEKHO2Q8TD55 490 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SMPDL3AQ92484 453 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 BHMTQ93088 406 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FAM162AQ96A26 154 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 MPP4Q96JB8 637 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ULBP1Q9BZM6 244 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NT5MQ9NPB1 228 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SH3BP4Q9P0V3 963 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 WARS2Q9UGM6 360 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ERGIC3Q9Y282 383 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 RPL36Q9Y3U8 105 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PRSS51A0A1B0GVH4 220 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 XPNPEP2O43895 674 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NUDT14O95848 222 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 THRBP10828 461 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 GLULP15104 373 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 POLR2JP52435 117 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NR6A1Q15406 480 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC44A4Q53GD3 710 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 EEF1DP3Q658K8 133 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TAPT1Q6NXT6 567 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FUT10Q6P4F1 479 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 KRT74Q7RTS7 529 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ADAT2Q7Z6V5 191 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CYGBQ8WWM9 190 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CPB2Q96IY4 423 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SIK2Q9H0K1 926 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CREBZFQ9NS37 354 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CNOT2Q9NZN8 540 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ATP11BQ9Y2G3 1177 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 INSL6Q9Y581 213 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ALPK2Q86TB3 2170 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SERPINA3P01011 423 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CAPN1P07384 714 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC10A3P09131 477 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 HALP42357 657 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 RPS9P46781 194 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SHQ1Q6PI26 577 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 RNF135Q8IUD6 432 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 BMFQ96LC9 184 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 KCNH6Q9H252 994 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF275Q9NSD4 429 aaPredicted RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ABT1Q9ULW3 272 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CENPXA8MT69 81 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 DCXO43602 365 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PLPP4Q5VZY2 271 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ZFAND4Q86XD8 727 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TRAM1L1Q8N609 369 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TRPV3Q8NET8 790 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 GANCQ8TET4 914 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CCDC3Q9BQI4 270 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TBCDQ9BTW9 1192 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 GABARAPL1Q9H0R8 117 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CAAP1Q9H8G2 361 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PELI2Q9HAT8 420 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 KLK8O60259 260 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NOBOXO60393 691 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 MFN2O95140 757 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NR2F6P10588 404 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SSTR1P30872 391 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 GBE1Q04446 702 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 EN1Q05925 392 aaPredicted RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NAA30Q147X3 362 aaPredicted RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ZNHIT3Q15649 155 aaPredicted RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FAM205BPQ63HN1 556 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ZCCHC12Q6PEW1 402 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 METAP1DQ6UB28 335 aaPredicted RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 BBS10Q8TAM1 723 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 RAD51AP1Q96B01 352 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SALL4Q9UJQ4 1053 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 IFNGP01579 166 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FGBP02675 491 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 IFNA16P05015 189 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 AMPD1P23109 780 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC1A2P43004 574 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CDK9P50750 372 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 INAVAQ3KP66 663 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 MZT2AQ6P582 158 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 IFNL1Q8IU54 200 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CPA6Q8N4T0 437 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 KLHL23Q8NBE8 558 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 C11orf49Q9H6J7 331 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms