RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 NFKB1P19838 968 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 HLA-DMAP28067 261 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 NMBRP28336 390 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CLCN5P51795 746 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZIK1Q3SY52 487 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 C6orf136Q5SQH8 315 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CERCAMQ5T4B2 595 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TMEM207Q6UWW9 146 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF517Q6ZMY9 492 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 Q6ZSR9 355 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PID1Q7Z2X4 250 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SLC46A3Q7Z3Q1 461 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 UNC93AQ86WB7 457 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 RNF31Q96EP0 1072 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TOE1Q96GM8 510 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 ZNF599Q96NL3 588 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FYTTD1Q96QD9 318 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 TTLL2Q9BWV7 592 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 GTSE1Q9NYZ3 720 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 FBXO10Q9UK96 956 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 BOLA1Q9Y3E2 137 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PEX16Q9Y5Y5 336 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 A0A0U1RQS6 177 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 BMP8BP34820 402 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CAP2P40123 477 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SEPHS1P49903 392 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 CPT1AP50416 773 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TCP10Q12799 353 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ASAH1Q13510 395 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 IMPG1Q17R60 797 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 GPAT3Q53EU6 434 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ATAD3CQ5T2N8 411 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 BMP8AQ7Z5Y6 402 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DNAAF3Q8N9W5 541 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PPP1R36Q96LQ0 422 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 OMDQ99983 421 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 B3GNT4Q9C0J1 378 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 GABARAPL1Q9H0R8 117 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 POLE4Q9NR33 117 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 IGSF5Q9NSI5 407 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 VAPAQ9P0L0 249 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 NUDT5Q9UKK9 219 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TNRC18O15417 2968 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 FAM234BA2RU67 622 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MYCLP1P12525 358 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 CYP2C18P33260 490 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 TALDO1P37837 337 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 OAZ1P54368 228 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 MAPK11Q15759 364 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 OTUD1Q5VV17 481 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 CELF2-AS1Q8N7Q2 184 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DENND6BQ8NEG7 585 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 REPS2Q8NFH8 660 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 ST13P5Q8NFI4 369 aaPredicted RBP5.06□□□□□ -1.6
RIF1-203ENST00000428287 MAP6Q96JE9 813 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PTTG3PQ9NZH4 202 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 NME7Q9Y5B8 376 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 PCDHB5Q9Y5E4 795 aa5.06□□□□□ -1.6
RIF1-203ENST00000428287 DMXL2Q8TDJ6 3036 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 H3BMM5 538 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RGS10O43665 173 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 FZD6O60353 706 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MT-ND1P03886 318 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HGFP14210 728 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HMGCLP35914 325 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TIMM50Q3ZCQ8 353 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TPRG1LQ5T0D9 272 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 DCAF8Q5TAQ9 597 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ZBTB37Q5TC79 503 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 FAM205BPQ63HN1 556 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SWSAP1Q6NVH7 229 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PAGE2Q7Z2X7 111 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 B3GNT5Q9BYG0 378 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CCL27Q9Y4X3 112 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 KLF2Q9Y5W3 355 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 KLK8O60259 260 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GRAP2O75791 330 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 IL7P13232 177 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HOXB9P17482 250 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 EDNRBP24530 442 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MTHFRP42898 656 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RGS6P49758 472 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CLK1P49759 484 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CACNB3P54284 484 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GLYR1Q49A26 553 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 LAYNQ6UX15 382 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CILP2Q8IUL8 1156 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CCDC24Q8N4L8 307 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 DNAJC22Q8N4W6 341 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 FAM86B1Q8N7N1 296 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 NDNFQ8TB73 568 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 C18orf25Q96B23 403 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CDCA4Q9BXL8 241 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MAGEB5Q9BZ81 275 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HOXC10Q9NYD6 342 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 AZIN1O14977 448 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms