RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ABCE1P61221 599 aaKnown RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 ASPHQ12797 758 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 SETDB1Q15047 1291 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 USP39Q53GS9 565 aaKnown RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 PYCR3Q53H96 274 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 FAM219BQ5XKK7 198 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 RD3Q7Z3Z2 195 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 RAB44Q7Z6P3 723 aaPredicted RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 CPLX4Q7Z7G2 160 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 PDZD3Q86UT5 571 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 TMEM105Q8N8V8 129 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 OR6Y1Q8NGX8 325 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 BCAS4Q8TDM0 211 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 ZNF473Q8WTR7 871 aaKnown RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 TSACCQ96A04 125 aaPredicted RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 ESAMQ96AP7 390 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 CCDC126Q96EE4 140 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 L3HYPDHQ96EM0 354 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 NSUN5Q96P11 429 aaKnown RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 CCT8L2Q96SF2 557 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 SORT1Q99523 831 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 TMEM79Q9BSE2 394 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 TIMM29Q9BSF4 260 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 SHCBP1LQ9BZQ2 653 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 WWP1Q9H0M0 922 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 MIR1-1HGQ9H1L0 117 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 PCED1AQ9H1Q7 454 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 OR52A5Q9H2C5 316 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 RMI1Q9H9A7 625 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 KLC4Q9NSK0 619 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 WWOXQ9NZC7 414 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 MARCOQ9UEW3 520 aaPredicted RBP11.8□□□□□ -0.52
RFC4-206ENST00000427785 PDE10AQ9Y233 779 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 HS3ST3A1Q9Y663 406 aa11.8□□□□□ -0.52
RFC4-206ENST00000427785 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 CCDC189A1A4V9 331 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 PABPN1LA6NDY0 278 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 NDUFAB1O14561 156 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 MAP3K13O43283 966 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 KLK8O60259 260 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 PSIP1O75475 530 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 RASGRP1O95267 797 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 FAM107AO95990 144 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 RPS17P08708 135 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 ENO2P09104 434 aaPredicted RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 THEGLP0DJG4 465 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 TSPAN8P19075 237 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 CYP2A7P20853 494 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 GRK2P25098 689 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 CD27P26842 260 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 HTR1BP28222 390 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ALDH18A1P54886 795 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 YPEL5P62699 121 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 HERVK_113P63132 956 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 SRSF5Q13243 272 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 CCSMST1Q4G0I0 132 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 UNC50Q53HI1 259 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ZNF678Q5SXM1 525 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 DUS1LQ6P1R4 473 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 SLC36A4Q6YBV0 504 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 FRMD7Q6ZUT3 714 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 HID1Q8IV36 788 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 RASGRP3Q8IV61 690 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 PDPRQ8NCN5 879 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 AGR3Q8TD06 166 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ASB11Q8WXH4 323 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 SCARF2Q96GP6 870 aaPredicted RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 C7orf26Q96N11 449 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ELAC2Q9BQ52 826 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 ERVK-6Q9BXR3 956 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 PITPNM3Q9BZ71 974 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 GSTO2Q9H4Y5 243 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 NPHS2Q9NP85 383 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 GPR27Q9NS67 375 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 THAP1Q9NVV9 213 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ARL15Q9NXU5 204 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 TMCO1Q9UM00 188 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 ATXN2Q99700 1313 aaKnown RBP11.79□□□□□ -0.52
RFC4-206ENST00000427785 HEATR5BQ9P2D3 2071 aa11.79□□□□□ -0.52
RFC4-206ENST00000427785 CACNA1EQ15878 2313 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 STX16-NPEPL1H3BU86 382 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 GFYI3L273 518 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 STX16O14662 325 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 SLC16A5O15375 505 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 NPHS1O60500 1241 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 SUPT7LO94864 414 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 MATN4O95460 622 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 CATP04040 527 aaKnown RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 WNT1P04628 370 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 SLC35G4P0C7Q5 338 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 KITP10721 976 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 RPL10P27635 214 aaKnown RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 HSPA7P48741 367 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms